Camelina sativa (false flax): 104703367
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Entry
104703367 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104703367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104703367
03036 Chromosome and associated proteins [BR:
csat03036
]
104703367
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104703367
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104703367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
DUF3144
Motif
Other DBs
NCBI-GeneID:
104703367
NCBI-ProteinID:
XP_010417676
LinkDB
All DBs
Position
7:complement(29985447..29990503)
Genome browser
AA seq
1045 aa
AA seq
DB search
MTSVQPFRETSWMAGNLDSQKKRRISVGGVTALSEHSKEIIDSFPMLNSPDYFLKPCMLE
LVEREIENPGYCSRVPDFTIGRIGYGYIKFLGNTDVRRLDLDQIVKFQRHEVIVYDDESS
KPVVGEGLNKAAEVTLIVNIPNLTTLGKLQVDHIAYKLKQSAERQGATFISFDPDNGLWK
FLVPHFSRFGLSDDEAEDIAMDDAPGLGDPVGLDGDKVADIVEEHQMETSEPELSHSLPA
HLGLDPRKMKEMRMLMFPSEDLNEADDFREQTSHHMASLTKQHVRPSQKISQRNSHQDTP
PVLRKTPLALLEYNPGNDKSSPGSILMVQQNKNLAVKKSKMGGFELDISHVTPLSDNYSR
NVVDAALFMGRSFRAGWGPNGVLFHTGKPICSSSSQMVLSSVVNKEKIAIDKVVWDRKEN
VQKELIDSAFEAPLSLHKALDHDEEEVTFGSFSLKLQRVVTDRVVLSDICRHYIGVIEKQ
LEVSGLSRSAKLYSMHQVMVWELIKVLFSDRQSTETLNYAASDNEEDMMQDVKEDSAEVN
TEALPVIRRAEFSYWLQESVSHRVQEDVSDLNGSGYLEHLFFLLTGRELDSAVELAISKG
DVRLACLLSQAGGSTVNRNDILQQLHLWRRNGLDFSYIEKERIKLYELLAGNIHDALQDF
KIDWKRFLGLLMWHHLPPDSSLPVIFRNYQLLLDQAKAPWPVPIYIDEGPADGFVSNKKR
SDLLYYLMLLHSKEEEEIDFLKTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLHT
LDMGFVAQLLSQGLCHWAIYVVLHIPFREDQPYLHVIVIREILFQFCEIWSSVESQRQFI
KDLGIPSEWMHEALAVYYNYHGDFIKALDHFIECANWQRAHSIFMTSVSHSLFLSANHSE
IWRIATSMDDRKSEIENWDLGAGVYMSFYLLKSSLQEDADTMVELEPLESKNESCRSFVG
RLNESLAVWGDRLPVEARVAYSKMGEEICDMLLSDLSKDPSRETQLSCFETAFDAPLPED
VRSTHLQDAVSLFSLYLSESGQISA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgttcaaccatttcgagagacttcatggatggctggaaatttggactcgcaa
aagaaaagaaggatctccgtaggtggagttactgccctaagtgaacattccaaagagatc
attgattcatttcctatgttaaattcgcctgactacttcttgaagccatgcatgttggag
ttggttgagcgagaaattgagaaccctggttattgcagcagggttcctgatttcacaatt
ggtaggattggttacggttatataaagtttcttgggaatacagatgttagaaggttagac
ctggatcagatagttaagtttcaaaggcacgaggtgattgtttatgatgatgagagctct
aagccagttgttggcgagggacttaacaaggctgctgaggtgactctgatcgtaaacata
ccaaatctaacaactttggggaaattgcaagttgaccatattgcttataaattaaaacag
agcgctgaaagacaaggggcaactttcatctcatttgatccagataatggtttatggaaa
tttttggttcctcatttcagcagatttgggttgagtgatgatgaggcagaagatattgct
atggatgatgccccaggtttgggagatcccgtaggactggatggggacaaggtagctgac
attgttgaagaacatcagatggaaacttccgagccagagctttctcactctcttcctgct
catctaggacttgatcctagaaagatgaaagaaatgagaatgctgatgtttcctagtgaa
gatctaaacgaagctgatgattttagagagcaaacttctcatcatatggcatccttgacg
aaacaacatgtaagaccttcacagaaaatttctcaaagaaatagtcatcaagatactcca
ccagtcttgcggaaaactccgcttgctttactggagtataaccctggtaatgataaaagc
tcccctggtagtatcctgatggtccaacaaaataagaatctggcagtgaaaaagtcgaaa
atgggaggtttcgagctagacatcagccatgtaacgccattatctgataactattctcga
aatgttgtggatgcagcattgtttatgggaaggtctttccgagcaggttggggaccaaat
ggcgtcctttttcacactggtaagccaatatgtagctccagttctcagatggtattgtct
tctgtggtcaataaagaaaagatagcaattgacaaagtggtttgggatagaaaggaaaat
gttcagaaagaacttattgattctgcattcgaggctcccttaagtctccacaaggcattg
gatcatgacgaagaagaagttacgtttggctctttcagtcttaaacttcagagagtggtc
actgatcgtgtagttctttcagatatctgccgacactatattggtgtaatcgagaaacag
ctggaggtttctgggttgtcaagatctgcaaagctgtattcgatgcaccaagtcatggtg
tgggaactcataaaagttctcttttctgacaggcagagtactgaaacgttgaattatgca
gcttctgataatgaggaagacatgatgcaagatgtgaaggaagattctgcagaagttaat
acagaagctcttccagttatccgaagagcagaatttagttattggctccaagaaagtgtc
agtcaccgtgtacaagaagatgtgagtgatctaaatggttctggctacctggagcactta
ttctttcttctgactggacgagagcttgattcagcagtggaacttgccatatctaaggga
gatgttagacttgcttgtttgttgagccaggctggtggatcaactgtaaaccgcaatgat
atcttgcagcagcttcacctttggagaaggaatgggctagattttagttacatcgagaag
gagagaattaagctttacgaattgcttgctggtaatatccatgatgcattacaagatttt
aaaattgactggaagagattcctagggttgttaatgtggcatcatctacctcccgacagt
tcattacctgtcatcttcagaaattatcaactcctactagatcaggcaaaagccccgtgg
cccgtcccgatatatattgacgaaggacctgcagatgggtttgtaagcaacaagaagcgt
tctgaccttttgtattatcttatgcttctgcacagcaaagaggaggaagaaattgatttc
ctgaagactatgttcagtgcattctcttcaactgacgatccacttgactatcatatgatc
tggcaccatcgaggaatcctagaagcagttggagctttcacttcagatgatcttcacact
ctcgatatgggatttgttgcacagcttctctctcagggcctttgtcattgggctatctac
gttgtccttcacatacccttccgtgaagatcaaccatatctacacgtcattgtcattcgg
gaaatcctgtttcaattctgtgaaatttggagttctgtggaatcacaacggcaatttatc
aaggacttgggtatcccatctgaatggatgcacgaagctctggcagtttactacaattac
catggagatttcataaaggctcttgaccactttattgaatgtgcaaactggcaaagagct
cattccatttttatgacgtcagtttcccattcattatttttgtcagctaaccattcagaa
atatggagaattgctacttcaatggatgatcgcaaatctgagattgaaaactgggatttg
ggtgccggggtatacatgtcattttatttacttaagagttcattgcaagaagatgctgat
acgatggtagaactggaaccccttgagagcaaaaacgagtcttgcagaagttttgtcggt
cgtttaaacgaatcattggctgtttggggtgacagattaccagttgaagctagagtggca
tattcaaagatgggagaggaaatatgcgatatgcttctgtcagatctaagcaaggatcca
agtcgagagactcagctaagctgttttgagacagccttcgatgccccattgccagaagat
gtgagatcaacgcatctgcaagatgctgtgtcactattttcactatatctgtcagagagc
ggccaaatctcagcttag
DBGET
integrated database retrieval system
