Camelina sativa (false flax): 104703602
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Entry
104703602 CDS
T05044
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104703602
Membrane trafficking [BR:
csat04131
]
Protein recycling
Others
EARP complex
104703602
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104703602
NCBI-ProteinID:
XP_010417940
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All DBs
Position
7:31094955..31103406
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AA seq
1133 aa
AA seq
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MQPNLFPFGTVLSNPFLFNGGDLNELGSGAGFESSRVFFLLPFLLSQGGSGGMDLSKVGE
KFLSSVKSATSLGLLPSPPSFSDRPEIPARAAAAAAVARALAGLPSDQGLSISSTATELS
SIYGNRPLPQQVEELEQGFYEEDFDSVMHILENVPDDQSELAYFEKQATLRLVQLDRVAE
DLSHHVMEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVHNHSKK
KQALLDMLPILTDLRHARVMRSTLEDLVEEGNYCKAFQVLSEYLQLLDSLSEFSAAQEMT
RGVEVWLGRTLHKLDSLLLGVCQEFKEDSYVMVLDAYALIGDVSGLAEKIQSFFMQEVIS
ETHSVLKTIVGEDNSAATQYSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSYHEIMS
FTPEMKVESLISPSSKTTQMVDSVTRSSCDPQDGGLASAMSSGSIPSCTISAEESDGSGT
SSSVQQVLQASDSATDEPRDSGDAVSCGQSPWYYLRKESAAFVSETLQRGRRNLWQLTTS
RVSVLLSSPGASSTSIHQFLKSYEDLSIFILAGEAFCGFEVVDFREKLKGVCENYFTAFH
RQSMHALKMVLEKETWTKLSPDTVQTINFAGLVGDGAPLIISSRSATGSSRFPHSNKSNN
SVDPSGNRSGFSYWLKSGNPFSAKLTHYREDQDCSSANGAISRDDEGNDSIHDDVVNPKI
RDKIRVNGGSPVSEDENEDLLADFIDEDSQLPRRSFTRSQSRTLSSHCTNEDLTAQTGSS
LCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYQVFGQENTNSGGKGVADSFN
HRLKSSLSRISQECEQWIKPNLTSSPSSSLAFPNTVHSLADVTPANPLNTSGHLSGVSFS
LKERCAAVDTVSLVARILHKSKAHLQSMLMSRNGSLVEDFFGQLVGSVPDLTEHIHRTTA
RILLHVNGYVDRIANSKWEVKELGMEHNGYVDLMLGEFKHYKTRLAHGGISPEVQNRLLG
YGVEIFAEILVEGLSRIKRCTNEGRALMLLDFQVLINGLQHFVPTNVKPKLQIVETFIKA
YYLPETEYVHWARARPEYTKAQVVGLVNLVATMKGWKRKTRLEVIEKIESASA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaatctcttcccattcggcacagttttgagtaatccattcctcttcaatggc
ggagatctaaacgaacttggttctggtgctggattcgagagctctagggttttcttctta
ctccctttcttattatcccaaggcggcagtggtgggatggatttgtccaaggttggtgaa
aagttcctcagctctgttaaatccgctacttcgcttggtctcttaccttctcctccttcc
ttctccgatcgtcctgagattcctgcacgtgctgcagctgctgcggcggttgctcgtgct
ttggctggacttccttctgatcaggggttgagtatatcttctactgctactgagcttagt
tcaatttatgggaatagacctcttcctcaacaagttgaagagcttgaacaagggttttat
gaagaggattttgattcggtaatgcatattttggagaatgtaccggatgatcaaagtgag
ttggcttattttgagaagcaggccaccttgaggttggtacagctggatagagtggctgaa
gatctgtctcaccatgttatggagcatcatgaagtaatggtgaaggggatgaatttggtt
agagaacttgaaaaagatttgaagattgcaaatgtcatctgcaagaatggaagacgaaat
ttgacttcttctatgaatgaggcctccagagatcttattgtacacaatcattccaaaaag
aaacaagctcttctggatatgcttcctattctaaccgatctccgccatgcaagagtaatg
cggtcaactcttgaagaccttgttgaagaaggaaactattgcaaggcgtttcaagttcta
tcggagtatttgcagcttcttgacagtctatctgaattctcagcagcccaagagatgacc
cgtggtgttgaggtttggttaggaagaactcttcataagctggattcactattgttgggc
gtttgccaggagttcaaagaagatagttatgtaatggtccttgacgcttatgcactgatc
ggtgatgtctctggtcttgccgaaaaaatacaaagcttctttatgcaagaagttatctca
gaaacccactcagtgctaaagaccattgttggggaggataacagtgctgctacccaatat
agtagacttacctacagtgacctatgccttcagacaccagaatccaagtttaggcaatgt
cttttgagaacactagctgtgctgtttcagttaatatattcataccatgagataatgagt
ttcacgccagaaatgaaggtagaaagtttgatctcaccaagttctaaaacaactcaaatg
gttgattcagtaactagaagttcatgcgacccacaggatgggggcctcgcatcagccatg
agttctggaagtataccttcttgtacaatttctgctgaagagtctgatggaagtggaaca
tccagttccgtgcagcaggtgctgcaggcgtctgatagtgcaacagatgagcctagagat
tctggagatgcagtatcatgtggccagtcgccatggtactatctacgaaaagaaagtgca
gcttttgtttcagaaactcttcagagaggacgaagaaatctttggcaacttacaacgagc
cgtgtctcagttttgctctcttccccaggtgcttcatcaacaagtatacatcagttccta
aaaagttatgaagacctgagcatctttatccttgctggggaagcattctgtggatttgaa
gttgttgattttagggagaagctaaagggtgtatgtgaaaattatttcactgcgtttcat
aggcaaagcatgcatgcgcttaaaatggttctggagaaggagacatggacaaaattgtct
cctgatactgtgcaaactattaattttgctggtcttgtgggggatggggctcccctaatt
atttcttcccgcagtgccactggttcttccagattccctcactcgaataagtcaaataac
tcggttgatccaagtggtaacaggagtggattttcttattggctgaaaagtggaaacccc
ttctcagcaaagttaactcactatagagaagatcaagactgctcctcagccaatggagct
atctctcgagatgatgaagggaatgatagtattcacgatgatgttgtgaatcccaagata
agagataaaatacgcgttaatggaggtagtccggtttccgaagatgaaaacgaagacctt
cttgctgactttattgatgaggatagtcagcttccaagacgaagttttacacgtagtcaa
tcaaggactttatcttcacattgtactaatgaggatttgacagctcaaacaggatcgtcc
ctttgtcttctaagatcaatggataagtacgcgaggcttatgcagaaactagaaattgtt
aacgttgaattctttaagggaatatgccaattgtttggggtctttttctattttgtatat
caagtatttggtcaagaaaatactaattcaggtggaaaaggagtcgctgactctttcaat
catcgtttgaaaagcagcttatcccggatatcacaagagtgtgagcaatggataaaacct
aaccttacatcatcaccttcttcttcacttgcctttcccaacacagttcatagtcttgcg
gacgtgactccagcaaatcccttaaatacttctggtcacttatcaggcgtatcttttagt
ctcaaggaaagatgtgctgcagtggacactgtttctcttgtggctcggatattacataaa
tcaaaggctcatctccaatcaatgcttatgtcaagaaatggctctctggttgaagacttt
tttggtcaactggttggttccgtacctgatctgacagagcacatacataggacaactgcg
aggatactgctgcatgttaatggatatgtcgaccggatagctaattcgaaatgggaagtc
aaggagcttggaatggagcataatgggtatgttgatttaatgctcggggaattcaaacac
tacaaaacaaggcttgctcatggaggcatttcaccggaggtccaaaaccgcctactggga
tatggagttgaaatatttgcggagattcttgttgaaggtttatcacgaataaaaagatgt
actaatgaaggacgtgctctcatgttattagattttcaggttctaataaacgggctacag
cactttgtgcctacaaatgtgaagccgaagttacaaatagtcgaaacatttatcaaggca
tactatctgccagagacggaatatgttcactgggcaagggctcgtccggaatatacaaaa
gcgcaagtcgtgggactggtgaatttagtagccaccatgaaaggttggaagaggaaaacg
cggctggaagttatcgagaagatcgaatcagcttctgcgtag
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