KEGG   Camelina sativa (false flax): 104703615
Entry
104703615         CDS       T05044                                 
Name
(RefSeq) exosome complex component RRP43-like
  KO
K12586  exosome complex component RRP43
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104703615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104703615
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104703615
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 104703615
NCBI-ProteinID: XP_010417956
LinkDB
Position
7:complement(31161999..31164248)
AA seq 302 aa
MGLPDSSQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDARPLGKARDTIVNPGLVSTAD
GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIALEFHMPPICSPTVRPGRPADAAPVIS
KRLSDTILSSGMVDLKELCLVSGKAAWMGYLDIYCLNADGALFDAALLSAVAAFSNLEIP
VVALNDNGRIVAISGGKDEDNASIIEKKAVNKEKRKLTLKNIPFSLTCILHKNYILADPT
TEEESIMDTLVTVVLDASDQMVSLYKSGGTVLAYSSAVKSCVELARKRAKELKQILGEMD
ID
NT seq 909 nt   +upstreamnt  +downstreamnt
atggggttaccagattcatcacaagacttgtcgacagagatggaagttgatgctttcaga
cgaatcttccctcttcgtttctttgagcgtcatctctctgaatctcttcgacctgatgct
agaccacttggaaaagccagagacaccattgttaaccctggacttgtttcaaccgctgat
ggatctgctcttgccaagattggttccactactatgcttgctgctattagaatggaagtt
atgactccttctacagactcacctgatgaaggatgcatagctcttgagttccacatgccg
cctatttgttctcccactgttcgtcctggaagaccagctgatgctgctcccgttatttca
aagcgtttgtctgatactattctaagttctggaatggttgatcttaaagaactgtgccta
gttagtggaaaagctgcttggatgggttatctggacatatattgccttaatgctgatggt
gcccttttcgatgctgctctgctttctgctgttgcagccttttcgaatttggaaatccca
gttgttgctctgaatgacaatggaagaatagttgccatcagtggaggaaaagatgaagac
aatgcttcgatcatcgagaaaaaagcagtgaacaaggagaagagaaaacttacacttaag
aacatccctttctctttaacttgcatactccataagaactacatcttagcagatccaaca
actgaagaagagtcgatcatggacactctagtgactgttgttttagatgcctcggatcaa
atggtttctctctacaaatcaggaggaaccgttcttgcctactcatcagccgtcaagagc
tgtgtggagttagcaaggaagagagcaaaggagcttaagcagattctgggggagatggat
atcgactaa

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