Camelina sativa (false flax): 104703620
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Entry
104703620 CDS
T05044
Name
(RefSeq) RNA-binding protein 25-like
KO
K12822
RNA-binding protein 25
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104703620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104703620
Spliceosome [BR:
csat03041
]
Complex A
U1 snRNP components
U1 related factors
104703620
Complex B
104703620
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104703620
NCBI-ProteinID:
XP_010417962
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Position
7:complement(31190958..31197315)
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AA seq
910 aa
AA seq
DB search
MADGDSSSPATGDLNSQKPEPTTSIPIPNPSPTPPPPPQQHPPQVAALVQSVPPGPPYAP
PSQIPVPTNLPPPPPFHPGMQFNPVANFQNPSSGVPPPGVNSMGVPGSMPQYQGQPPNQA
GMRPFQPMANGYPGIHGVAPPGPMPPQGLLRYPSPYPTMVRPGFIMRPPGTIAVQLAPRP
AVPGMLGLRPIMMPPMVRPPSLPYVTPAEKPQTTIYIGKIATIENEFMMSILEFCGHVKS
CLRAEDPTTKKPKGFGFYEFESAEGILRAIRLLTQRTIDGQELLVNVNQATKEYLLKYVE
KKIETANKAKESQTVGTEENQAEGSESEREKLESAENETGKDGEPKKENIDIANSAVLTD
DEREADREAMEKIESAIEERLKSNPLPPPPPPPPADGSGMELAFKSKDGDSNTDITRSDA
AANDVEASGEHNRPDTSSPDWNKRNDRRSRERSEKEQEMDRYEREAERERARKEREQRRK
LEDAERAYQARLRQWERQEREKEKERQYEKEKEKDKERKRKKEIRYEEEEDEEDDESRRR
WHRGSLDERRRRRQREKEDDLADRLKEEEEVAEAKRSAEEQKLQQQQLDALRLLSGQAAI
GSETVQTSPIENDHNPTLQTVSESVHEHHAADCEQNGSGNESMAIDSNSGSEAHAPSKRL
GFGLVGSGKWTSVPCVFYEEDEDEAHKDKKMKPLVPIDYSTEEQEAVAHGGSGNTPPHLA
LAAEFAKRISSTNPKEETTETEKQRSRRSHDKASHRDRDRDRERDRDRDRVRDRGDGHSG
PTKDAKEPGKTKIPDTKFLDAKQLIDTIPKTKEDLFSYEINWAMYDKHQLHERMRPWISK
KIMEFLGEEEATLVDFIVSNTQQHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKRV
EAGVPVKSKA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgattcttcttctccggccacgggggatctcaactctcagaaaccggaa
cccactacttcgattccaattcccaatccttcaccaactccaccacctccgcctcaacaa
catccgccacaagtcgccgctcttgttcagtctgttccacctggtccgccttatgctcct
ccgtctcagattcctgtccccaccaatctcccgccgcctccaccattccatcccggtatg
caattcaatcccgttgcgaattttcaaaaccctagctctggagttcctcctcccggcgtg
aactctatgggggttcctggatccatgcctcagtatcaagggcagcctccgaaccaggct
ggtatgagacctttccagcctatggctaatggttacccaggaattcatggtgttgctcct
ccaggtcccatgcctcctcaggggcttctccgttatccttctccatatccaacaatggtt
cgtcctgggtttattatgcgcccgcctggtacaatcgctgttcaactagcaccacgacct
gctgttccaggaatgcttggtctccgtcccataatgatgcctcctatggtcagaccaccc
tctcttccttacgtaacacctgcagaaaagccccagactacaatttacattggcaagata
gcaaccatagaaaatgaatttatgatgtctattcttgagttttgtggccatgtcaaaagc
tgtttacgtgcggaagatcctaccaccaagaaacctaaaggttttggattctacgaattt
gaatcagctgaagggattctccgtgcaatacgcctactgacccaacgtactatagatgga
caagagcttttggttaatgttaatcaagcaacaaaggaatatttgttaaaatatgttgag
aagaaaatagagactgcaaataaagccaaggaaagtcaaactgtaggaaccgaagagaac
caagctgaaggttctgagagtgagcgagaaaaacttgagagtgctgagaatgagacaggg
aaggatggagaaccaaagaaagaaaacatcgatattgcaaattctgcggtcctaactgac
gatgaaagggaagcagacagagaggctatggaaaagattgaaagtgcaattgaagaaagg
ttaaagtccaaccctctgcctccaccacccccaccaccacctgctgatggttcaggcatg
gaacttgctttcaaatctaaggatggtgactccaacactgacataactaggagtgatgct
gcagcaaatgatgttgaggcttctggagaacacaataggcctgacacaagctcacctgat
tggaataagagaaatgacagaagaagcagagaaagaagtgaaaaggagcaagaaatggat
agatacgagagggaggctgagcgagaacgggcaaggaaagagagagagcaaaggaggaaa
cttgaggatgcagagcgtgcttaccaggctcgtcttcgacaatgggaacgccaagaaaga
gaaaaggagaaggaacgacagtacgagaaggagaaagagaaagataaagagcgtaagagg
aaaaaggaaatccgctatgaggaagaggaggatgaagaggatgatgaatcaagaagaaga
tggcataggggttcattagatgagagaagaagacggcgacaaagagaaaaggaggatgac
ttggctgatagattgaaagaagaggaagaggttgctgaggcgaagaggagtgccgaggag
caaaagttgcagcaacagcaattagatgccttaaggctcctatctggacaggcagcgatt
ggaagcgaaacagttcagacatcacctattgaaaacgatcataacccaactctccaaact
gtcagtgaatctgtccatgagcaccatgcagcagattgtgaacaaaatggttctggtaat
gaatccatggctattgatagtaatagtggatcagaggcacatgctccctcgaaaagatta
ggatttgggcttgtgggatctggaaagtggacatctgtaccttgtgttttctatgaggag
gatgaagacgaagctcataaggataaaaagatgaaacctttagttcctatagattactca
accgaggaacaggaagccgtggcccatggtggttcagggaatacaccccctcatttggct
ttagctgctgaatttgcaaaacgaatttcgagtactaatcccaaggaggaaacaacagaa
accgaaaaacaaaggagtagacgttctcatgataaggcaagccaccgggacagagacagg
gacagggaaagggatagagacagagacagagtcagggaccgaggtgatgggcatagtggt
ccaactaaagacgctaaagagcctggaaaaacaaagatacctgataccaagtttctggat
gcaaaacaattgatagatacgatcccaaagacaaaggaagacttattttcatacgagata
aactgggctatgtatgacaagcaccaattgcacgagagaatgaggccgtggatatcaaag
aaaatcatggagtttctaggagaagaggaagcgacgctggtagatttcattgtgtcaaac
actcaacagcacgtgaaagcgtctcagatgcttgagctgttgcaatcgattcttgacgaa
gaagctgagatgtttgtgctgaagatgtggagaatgcttatatttgagatcaagcgggtc
gaagctggagtcccggtaaaatccaaagcctga
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