KEGG   Camelina sativa (false flax): 104703716
Entry
104703716         CDS       T05044                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csat04812]
    104703716
Cytoskeleton proteins [BR:csat04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     104703716
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Katanin_con80 Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 NBCH_WD40 eIF2A Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_HPS5 VPS8_N Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 104703716
NCBI-ProteinID: XP_010418088
LinkDB
Position
7:31639667..31647118
AA seq 1208 aa
MAKRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTNLMSLCGHTSA
VDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGST
DANLKIWDIRKKGCIQTYKGHTRGINTIRFTPDGRWVVSGGLDNVVKVWDLTAGKPLHES
KFHEGPISSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRT
LFCGLDDSLKVYSWEPIVSHDGVDMGWSTLGNLCISEGKLLGCSYYQNSVGIWVSDISQI
EPYGIGSADKKECVEKILSALDDQSSDRIRSSPRRSSSPDYETKEIKNIYIDSAGGNSAV
AHKSVSLITPKVKATSTGQEVDNKSLILQSVVPWDCDIGKDSSDSGKESITFAKTKPGML
LRPAHVRKTPTKYDETKQSVAVQSEIPKKSASDDEKKLDTETAFDSERSVRKPFDVDDSI
IKSITNKFEQALLPESPTGMLLKPPRVQRSPSTKFNEARCAASVDSGALDSKLSGLESPK
DIDLPAGLKDDRGSNPCEDDIDNKSISSRSERVLSPEKAGGELKSLESPGGSKGSNSVKV
VRGVKVVSGRTRSLVERFERGEKITHSEDKAASATIVESSDAVEEESQTASVQAVSTTPT
QVMPVKLDQATNSTPVEAPVLSTRRTRSTPVRVMPVVLGRDTNMATDAPPVTSTRPDRTS
STNLISDVSCVTSTRQAMTSPAPVMPMILNQTSKLKSDEPPVTSTRPDRPSSTNLTSDEP
GVTSTRQDRTSPAPVMPMILNQTSKMKSDEPAVISTRPDRPSSTSLASDESGVTSTRQAR
TSPAPVMPMIPNETSKIKSVEPPVTSTRPDRPASTDLISDESSVTSTRQAKTSPALVTPV
ILSQRQKTNMKSDEPPVISRRPLRTSSARVMPVILNQASNSYDERPVSASRSARNSPARV
MPMKLNQAENMTSYEPQVALTRSARNHARVIPGRNNQASNLASNASHIRSRQRYSPTQTL
ATPAVLDQVTDMTLDEAYITETQPACDFLTQEEEPQISGRENDGDIWETLMETHNEVLNT
LQSRLTKVQVNFVSAILFSSFSLILTLDLFSQLAPVLTGLLGSRTERPVNVSLEMLLKLV
AVFGTVIQSTVSARRVVGVDLHAEERLQMCQSCSAELQKVHKILPLLTRRGGLIARKAQE
LNLVLQTP
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggcgaagcgtggatataagctccaggagtttttggcacattctgcaaatgtgaattgt
ttaagtatcggaaagaagacgtcgcggctctttataactggtggtgatgattataaagtc
aacctttgggctatcggcaagcctacaaatttaatgagtctatgtggacatactagtgca
gtggattcagtagcttttgactccgcagaagttttggtgcttgctggagcttcttcgggt
gtgatcaagctgtgggatgtagaagaagcaaagatggttcgagcttttactggacataga
tccaattgttctgctgttgaatttcatccctttggtgaatttttggcatcggggtcaact
gacgccaacttaaagatttgggacatcagaaagaagggatgcatacagacatacaagggt
catactcgtggcatcaacactatcagatttactcctgatggtcgttgggtagtgtcagga
ggacttgataatgttgtaaaggtatgggatttgactgctggaaagcctttgcatgaatct
aagtttcatgaaggacctatcagttccctagacttccacccactcgagttcctcctagcc
acaggttctgcagacaggactgtaaagttctgggatttggaaacgtttgaattgattgga
tctacccgaccagaggctactggagttcgttcaatcaaatttcatccggatgggcgaacc
cttttttgtggtttggatgatagcttgaaggtttattcatgggaaccaatagttagccat
gatggtgttgatatgggatggtcaacgcttggtaacttatgcatcagcgaagggaagctc
ttgggttgttcgtactaccaaaattccgtagggatttgggtgtcagatatatcgcaaatc
gagccatatggcattggatctgcggataaaaaagaatgcgtggagaaaatactcagtgct
ctggacgatcagtcctctgatagaataaggagtagcccaaggcgcagctcatccccagat
tacgagacaaaagagataaaaaacatatacatcgactctgcaggtggaaattcagctgtt
gcacataagtcagtatctctaattactccgaaagtcaaggcaacttctactggacaagaa
gtggacaataaatctctcatattgcaaagtgttgtaccatgggattgtgatattgggaaa
gactcttctgattcaggaaaggaatctatcactttcgcaaaaacaaaaccaggcatgcta
ctgagaccggctcatgtaagaaagacgccaacaaagtatgatgagaccaagcagtcagtg
gccgttcaatctgagattccaaagaaaagtgcatcggacgatgagaagaagctagatact
gagacagcatttgattcagaaagaagtgtcaggaaaccatttgatgttgacgattctatc
atcaagagtataaccaacaagtttgaacaagctttattaccagaatcaccaactggtatg
ctgctcaaaccacctcgtgtacagagatcaccaagtactaaattcaatgaggcaagatgt
gcggcatccgttgattctggagctttagacagtaaattgagtgggttagagtccccaaaa
gacatagacttgccagcagggcttaaggatgacagaggtagtaatccatgtgaggacgat
atcgataacaagagcatttcaagcaggtcagaaagagttctatcaccagagaaagctggt
ggtgaactaaaaagccttgaatccccaggaggtagcaaaggatcaaactctgtgaaggtt
gttagaggagtaaaagttgtttcgggaaggacgcggtcattggttgagaggtttgaaaga
ggggaaaaaattactcactctgaagacaaagcagccagtgcaacaatagttgagagctct
gatgctgtagaggaagagtcccagacagcatctgtacaggcagttagcacgacgcccacc
caggtaatgccagttaaacttgatcaggcaactaactcaacgccagttgaagctcctgtg
ttatcaacacgacgaactagaagtactccagtcagagtaatgcctgtggtactcggtcga
gacactaatatggcaactgatgcgcctcctgtaacatcaacacgacctgataggacttct
tctactaatttgatatctgatgtgtcttgtgtaacatcaacacgacaagctatgacttct
ccagctccagtcatgcctatgatactcaatcagacatcaaaattgaaatctgacgagcct
cctgtaacatcgacacgacctgataggccttcctctactaatttgacatctgatgagcct
ggtgtaacatcaacacgacaagataggacttctccagctccagtcatgcctatgatactc
aatcagacatcaaaaatgaaatctgatgagcctgctgtaatatcaacacgacctgatagg
ccttcgtctactagtttggcatctgatgagtctggtgtaacatcaacacgacaagctagg
acttctccagctccagtcatgcctatgatacccaatgagacatcaaaaataaaatctgtt
gagcctcctgtaacatcaactcgacctgatagacctgcatctactgatttgatatctgat
gagtcttctgtaacatcaacacgacaagctaagacttctccagccctagttacgcctgtg
atactcagtcagcgtcaaaaaactaacatgaaatctgatgagcctcctgtaatatcaaga
agaccacttaggacctcttcagcgcgagtaatgcctgtgatactcaatcaagcatctaac
tcgtatgatgagcgtcctgtatcagcttcacgatcagctagaaattctccagcccgtgta
atgcctatgaaactcaatcaagcagaaaatatgacgtcttatgagccccaagttgcatta
acacgatcagctaggaaccatgcccgtgtaattcctgggagaaacaaccaagcaagtaac
ttggcatctaatgcatctcatataagatcaaggcagcgatatagcccaactcaaacgctg
gcaacacctgcagtacttgatcaggtgactgatatgacactggatgaggcatatataacg
gaaactcaaccagcttgtgattttttaacccaggaggaagagcctcagatatctgggagg
gaaaatgatggtgacatttgggagactttaatggaaactcataatgaagttttaaacact
cttcaatcaaggttaacaaaagtacaggtaaattttgtctctgctattcttttttcatcg
ttttctcttattttaacattggatctgttttctcagttagcacccgtcctcacaggtttg
ttggggagcaggactgagaggcctgtaaatgtctccttggaaatgctcttgaagcttgta
gcagtgtttggtacagttatacaatcaactgtttcagcacgacgagtcgttggcgttgat
cttcatgcggaagaaaggttacaaatgtgccaaagttgttctgcggaattgcaaaaggtt
cacaagattcttccactactcacaaggcgaggtggtctcatagcaagaaaggctcaagaa
ctaaacctagttcttcaaacaccttag

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