Camelina sativa (false flax): 104703820
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Entry
104703820 CDS
T05044
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104703820
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104703820
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104703820
NCBI-ProteinID:
XP_010418201
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Position
1:3085667..3089102
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AA seq
350 aa
AA seq
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MYEKFIILSAFFLTFLPSCFSSYPYNHRDADPFMSSDVYYETNHLHGHITRSSHTKNRHG
NYAPRSSPQAFNVNSFGAKANGNDDSQAFMKAWQSACSSTGIVYIVVPNNRKYMLKPVQF
SGPCKSSLIVFKIYGMIEAWENPSDYKVRRHWIVFENHVSGTRNILIQDSVIRTGDDCIS
IVSGSENVRATGITCGPGHGISIGSLGEGNSEAYVSNVVVNKATLIGTTNGVRIKTWQGG
RGMAKNIIFQDIIMKNVTNPIIINQDYCDRVESCPEQKSAVQVSNVLYKNIQGTSSRPVA
VNFACSKSIPCRGISMQNVKLVDQTQQDVSKASCSNVRLNTLGNVSPLYH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaagttcataatcttatcagcatttttcttaacgtttctcccttcttgtttc
agcagctacccatacaatcatagagatgctgatcctttcatgtcttccgatgtttattac
gaaaccaatcatctacatggtcacattactcgcagcagtcatacgaaaaatcgccatggt
aattatgctcctagatcttctcctcaagcttttaacgtcaactcttttggtgctaaagcc
aatggaaacgacgattctcaggcgttcatgaaagcttggcaatcagcttgttcgtccacc
ggaatagtttacatcgtggttccgaataatagaaaatacatgcttaaaccggtccaattc
tctggtccatgtaaatcatccttgattgtttttaagatctacggaatgattgaggcatgg
gaaaatccatctgactacaaggtacgtaggcactggattgtgtttgaaaatcacgttagc
ggaactcgcaatatcttaattcaagactctgtcatccgtactggtgatgattgtatatcg
atagtgagtgggtcagagaatgtgagagcgacaggcattacttgcgggccgggtcatgga
atcagcattggaagtttgggagaaggtaactcagaagcatatgtttcaaatgtggtagtc
aacaaagcgactcttataggaaccactaatggtgtgagaatcaagacttggcagggagga
cgtggaatggcaaagaacatcatattccaagacatcataatgaaaaacgttacaaaccca
ataatcatcaaccaggactactgcgaccgtgttgaatcatgccccgaacagaaatcggcc
gtccaagtgagcaatgtgttgtacaaaaacatacaagggacgagctcaagaccggtagct
gtgaactttgcgtgcagcaagagcatcccatgtcgaggaatttcaatgcaaaacgttaaa
ttggtcgaccaaacccaacaagatgtctccaaagcttcttgctccaatgtgaggttgaac
accctaggaaacgtttctcctctttatcactga
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