Camelina sativa (false flax): 104704250
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Entry
104704250 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 1-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104704250
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csat01002
]
104704250
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104704250
Enzymes [BR:
csat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104704250
Peptidases and inhibitors [BR:
csat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104704250
Ubiquitin system [BR:
csat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104704250
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
104704250
NCBI-ProteinID:
XP_010418669
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All DBs
Position
7:3704355..3708155
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AA seq
1059 aa
AA seq
DB search
MGMKSKKGQKPPNWRRPSTFAQKVTKQSVEITEEVVGTMTEKRSCLHCDRYVDLDKLLKT
IESSQQIKCGECNQGLHVKGGGSKWSMSGNYGKWSMSGNYGFCFSARKAIWVCLECGYYV
CGDVGLPTGSQSHVVRHFELTRHRLVIQCENPQLRWCFPCQSLVSFEKEENGEKKDLLLE
VVELIRERSSNTSSARVETENLWSGSGGFTGGTREARDGYAVRGLVNLGNTCFFNSVMQN
LLSLDQLREHFLKEDMFGGGPLVSSLKELFEDTKSKVSFFRNAINPKGLFFSVCYQAPRF
RGYQQHDSHELLRYLLDGLSFEESSMRQKLGDSNSDDDSFTHQKPTLIDSIFGGEISSTV
SCMECGHSSKVFEPFLDLSLPIPSKRSPPEKQQTLSPEQKVGNNGGVSKDSDVVSAKPAS
DHNSTVPILENPSTMTLDDNQVSGDISDTEQGDISDTAPSTEAKGVNQTLVGSTETLMHD
NDGIAKPETVPDEEDTQSDEDTDASGISSESDDEPRICGYPDLGKSSSSGNLLADEELPL
MVADSXILYMPYKDDISYDDNTVGEVKGGASSYVRGHHVQIDETNISCNNGTVQASEGEG
SSSNVSSDHEPKIDYVDFSSFFDEPAISEGPVFRLPSKAKVSEAGFVAVSSNDKTVQASE
GEGSSSYVNGYHERDIFHFRRFLDELEISERPFYRPKSXSEAGFMAMSSNEKTVRPGMGE
AYSSFMSCDNKQDRDYADFISRMYNVPERPVFGPPSNAKVSEVGFMAVSRDSDPEVVADS
DSPVSVDGCLAQFTKPEILSEDNAWHCENCSKNLKLQRLREKREAKVGLSNGWVDENEAS
SASAIDECIDVDCKAGVIELLNCKKEKNAIDDGVLGDSDAKQDPITSYVTETPILGRETI
SSQPASGYECENWEDKAVDSEEVIVKRAATKRVLVNKAPPVLTIHLKRFSQDARGRLSKL
RGHVDFKEYLDLSHYMDKTRLTEKDQPVYRLAGLVEHRGTMRGGHYIAYIRGGDKARRES
DIKEPNASIWYHASDAWVRRVSFEEVLRSEAYILFYERI
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgaagtcaaagaagggtcaaaagcctccaaattggagacggccttcaaccttc
gcccagaaggtaactaagcaaagcgtggagataactgaggaggttgttgggacaatgacg
gaaaaaagatcttgtctccattgtgatagatatgttgatttggataagctgttgaaaacg
attgaatcttctcaacaaattaagtgtggagaatgtaaccaaggattgcacgtgaaggga
ggaggaagtaagtggagcatgagtggaaactacggtaagtggagcatgagtggaaactac
gggttttgtttttctgctagaaaggctatttgggtttgcttggaatgtggctattacgtc
tgtggagatgttggtttgccgactggatctcagagtcatgttgtgcggcacttcgagttg
acgcgtcaccgtttggtgattcagtgtgaaaatcctcagttaagatggtgtttcccatgc
caatcacttgtctcttttgagaaagaagagaatggtgagaagaaagatttgttgctggaa
gttgtggaattgattagagaacgatcttcaaacacgtcctcagctagagttgaaactgaa
aatttatggtcaggaagtggtggtttcactggtggtacacgagaagcaagagatggatat
gctgtaagaggtttagttaaccttgggaacacatgtttctttaactctgtaatgcagaac
cttctctctttggatcaattacgtgagcacttcttgaaagaagatatgtttggtggcggg
cctctcgtttcttccttgaaggaattatttgaagacacaaaatcaaaggtaagctttttc
aggaatgcaataaatccaaaaggcttattcttttctgtctgttatcaggctccccgattt
aggggatatcagcagcatgacagtcacgagttgctaaggtatttgttggacggtttgagc
tttgaagaatcaagcatgaggcaaaagcttggtgattctaatagtgatgatgacagtttt
acacatcagaaacctactctcatagattctatatttggaggtgaaatttcaagcactgtt
tcttgtatggaatgtgggcattcctcaaaagtgtttgaaccctttctggatctctcttta
cctattccgtccaagagatctcctcctgaaaagcaacaaaccctttctccggaacaaaag
gttggtaataacgggggagtcagcaaagattcagacgttgtgtcagctaaaccggcatcg
gatcacaattccactgttcccatcttagagaacccttctactatgacccttgatgataac
caggtctctggtgatattagtgataccgaacaaggtgatattagtgataccgccccatca
actgaggctaaaggagttaatcagactttggtaggtagtacagaaacgctgatgcatgat
aatgatggaattgcaaaaccagaaactgtaccagatgaagaagatacacagtctgatgaa
gacacagatgcaagtgggatttcctcagagagtgatgatgagcctcgaatttgcggttat
cctgatttagggaaaagttcttcatctggaaatctattggctgatgaagagcttccattg
atggttgcagattcttagattctgtacatgccttataaagatgacatatcctatgatgat
aacacagttggagaagttaaaggtggggcttcatcatatgtgaggggccaccatgtacaa
atcgatgagactaacatctcctgtaataatggaacagttcaagcaagcgagggtgaaggt
tcctcgtcaaacgtgagcagtgatcatgaaccaaaaatagattatgttgactttagcagt
ttttttgacgagcctgcgatatctgaaggacctgttttcagactgccatctaaagctaaa
gtttctgaagctggttttgtggctgtcagcagtaatgataaaacagttcaagcaagtgag
ggtgaaggttcctcgtcatacgtgaatggttaccatgaacgagacatttttcactttcgc
agatttcttgacgagcttgagatatctgaaagacctttttaccgaccgaaatcanngtct
gaagcgggttttatggctatgagcagtaatgagaaaacagttaggccaggtatgggtgaa
gcttattcatcattcatgagctgtgacaataaacaagacagagattatgctgactttatt
agcagaatgtataacgtccctgaaagacctgtttttggaccgccatctaatgctaaagtt
tctgaagttggttttatggctgttagcagagactccgatcctgaagttgttgctgattcg
gattcaccagtgtctgtagatgggtgtttggctcagttcaccaagcctgagattttgtca
gaagacaatgcttggcattgtgagaattgttcgaagaacctaaaactccagcggttgaga
gaaaagagagaagctaaagtaggattgagcaatggatgggtggatgaaaatgaagctagt
tcggcatcggctattgatgaatgtatagatgtcgactgtaaagccggagtcatagaattg
ctaaactgcaagaaagagaaaaacgctatagatgatggagttctgggagactcagatgca
aagcaagatccaattacttcttatgttactgaaactcctatcctcggtagagaaaccatc
agttctcaaccagccagtggctatgaatgtgaaaactgggaagacaaggcagtagattct
gaggaagtgattgtaaaaagagctgctactaaaagggtacttgtaaacaaggcaccacct
gtcttgactatacatctcaaaaggtttagccaagatgctcgaggcaggctaagcaagtta
cgtggccatgttgacttcaaagagtacctcgatcttagccattatatggataaaactagg
ttgaccgaaaaagaccagccggtttataggttggctgggttagtggagcatcgagggaca
atgagaggaggtcattatattgcttacattagaggtggtgacaaggctaggagggagtct
gatattaaagaacctaacgcatcaatatggtatcacgcaagcgatgcttgggttcgacgt
gtttcttttgaagaagttctccgttctgaagcttatatcttattttacgaacgtatctga
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