| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like
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| KO |
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| Organism |
csat Camelina sativa (false flax)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104704338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csat03019]
104704338
03012 Translation factors [BR:csat03012]
104704338
Enzymes [BR:csat01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104704338
Messenger RNA biogenesis [BR:csat03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104704338
Translation factors [BR:csat03012]
Eukaryotic type
Initiation factors
Initiation associated factors
104704338
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:5344816..5353327
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| AA seq |
1209 aa
MGNKRFRSDNAAGKQTSVEATRIWASKVIEDFRASGNQVYTFEHNLSNNERGVIHQMCRK
MGIQSKSSGRGEQRRLSIFTSRHKNGKNKEANEKSNKEKLKCVSFPPGADAILQDLFTHY
PPCDGDTAATSFNKYSGHSGKQGQWKDDFFGKPKISSEEILEMVASLSSRLKKDKALKEI
AKLRSKLPITSFRDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKGETCKIVC
TQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGS
VSCVSDITHIIVDEIHERDCYSDVMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGC
PVVRVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSIPDQKFELTDEYKLALDEAIIL
AWTNDEFDALLDLVSSSVSHEIYNYQHESTWLTPLMVFAGKGRISDVCMLLSFSADLNLK
SKDGMTALELAESENQLEAAQIIREHADNSQSNSQQGKQLLDKLATNIAESAVTIDDVVY
VIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQREGRAGRCQPGICYHLYSRLRAASMPD
FKVPEIKRMPVEELCLQVKILDPNCKTNNFLQKLLDPPVDQSIANALSILQDIGALTPQE
ELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAA
AAKLELASLCGGDSDHLAVVAAFECWKIAKERGLSAEFCSQYFVSPSAMKMLDQMRSQLE
SELKRHGIIPNDISSCSQNSRDPGILRAVLSVGLYPMVGRLCPAFGNNRRTIVETASGAK
VRVHSLSNNFNLSSKKYDESLVVFDEITRGDGGMHIRNCTVVRDLPLLLVSTEIAVAPTV
SSDSDDSDEEEEDEEGGANTNADGMDIHKEESRSGAKMMSSPENSVKLVVDRWLPFRTTA
LEVAQMYILRERLMASILFKVTHPREHLPPHLGASMHAIACVLSYDGHAGLSYPPESMGP
KHSRTEMYDTGGWEEKPSSFLNSLFWSLSLKENKHPSHTNRNRQHDYNMAPTEAASIPRQ
QSNQQRNPKSANNADLGKKKGKMLVNPTNGINYPEAASVAKHSKHKSANSSSSGNKKENM
TSDQANGKKQPNAPPREAAASVAKNQSTKKTKTRSGNNSDSGKKKEQYVPKVDIHKRQRE
DKAEHKGNA |
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| NT seq |
3630 nt +upstreamnt +downstreamnt
atggggaacaagagattcaggtctgataatgcagcagggaagcaaacttctgtcgaagct
actaggatttgggcgtctaaggttatcgaagactttagagcctccgggaatcaagtttac
acgtttgagcataatctatcaaataacgaacgtggcgtgattcatcagatgtgccggaaa
atgggtattcaatcgaaaagttctgggcgcggagaacaaaggcgtctttcaatattcaca
agcaggcacaaaaatgggaagaacaaagaagccaatgagaaatcgaacaaagaaaagctc
aaatgtgtgtcatttccgccaggggcagatgctattctgcaggatttatttactcactat
ccaccttgcgacggagacactgctgctacatcatttaacaagtactccgggcactcgggt
aaacaaggacaatggaaagatgattttttcgggaaaccaaagattagcagtgaagagatt
ctagaaatggtggcgtctttgagttctagacttaagaaggacaaagctcttaaggagatc
gctaagctgcggtcaaagcttcccatcacatcctttagagacgcaattacatctgcagtg
gaatccaatcaggttattctcatttctggtgaaactggttgcgggaaaactactcaggtg
cctcaatatcttttagaccatatgtggtcaagcaaaggagaaacttgcaaaattgtttgc
acccaacctcgtcggatatccgcgatgtcagtttcggaaagaatatcttgtgaaagaggt
gagagcattggagaaaacattggttacaaggttcgactccaaagcaaaggtggaaggcac
tcatcagttgtattctgcaccaatggcattctcctgagggtgcttgtaggcaaaggctct
gttagctgtgtttccgacataactcacatcattgtggatgaaatccatgaaagggattgc
tactcggatgtcatgttggcaattataagggacttgcttccgtcaaatcctcatctccgt
ctgattctcatgagtgctacgcttgatgctgagagattttcgggatattttggaggctgc
ccagttgtccgtgtccctggattcacttatccagtgagaaccttgtacttggaggatgtt
ctctctattctgaaatcaggtggagataatcatctaagctctaccaacttgagtatacca
gaccagaagtttgaattgacggacgaatataaacttgctttagatgaagcaatcatcttg
gcttggacaaatgacgagtttgatgccctcttagatctagtttcttctagtgtaagtcac
gagatctacaattatcagcacgaatcaacctggctaacaccactaatggtctttgctgga
aagggcaggatcagtgatgtctgcatgctcctctcatttagtgcagacttgaacttaaag
tctaaagatggtatgacagcattagaattggcagaatcagagaatcaactagaagctgct
caaataatcagggaacatgcagacaattcccagtctaattctcagcaaggaaaacagtta
cttgataagcttgcgacaaatattgctgaatcagcagttaccattgatgatgtggtttat
gtgatagatagtggccggatgaaggaaaagagctatgatccttacaataatgtttcaacc
ctccaatcttcttgggtatcaaaagcaaatgcaaaacagcgtgagggccgtgcaggccga
tgccaacctggtatttgttatcatctctattctagacttcgggcagcctctatgccagat
tttaaagttcctgaaattaagaggatgcctgtagaagaactctgcttacaggttaagata
cttgatccaaactgtaaaacaaataatttccttcagaaactgttggacccgcctgttgat
caaagtattgcaaatgccttaagcatactacaggacatcggggccctgacacctcaggaa
gagctgacagaacttggagagaaatttggtcatctcccagttcatcctctgattagcaaa
atgcttttcttcgctgtattagtaaactgtctggatccagcacttactctggcatgtgca
gccgactacaaggaaccatttacgatgcctatgtcgccagttgaaagacaaaaagctgct
gctgcaaaacttgaacttgcgtcactttgtggaggtgacagtgatcaccttgcggttgtt
gctgcctttgaatgctggaaaattgcaaaagaaagaggtctttcggcagagttttgctct
cagtacttcgtctctcctagcgctatgaagatgttggatcaaatgcgtagccaacttgag
tcggaacttaaaagacatgggattattcccaatgatatttcaagctgtagccagaattcg
cgtgatcccggtatactccgtgctgttctatcagtaggattgtatcctatggtgggaaga
ttgtgcccagcttttggtaataatcgaagaactatagtagagactgctagtggtgccaaa
gttcgtgtgcattcactgtcaaacaacttcaacttgtcgtcgaaaaagtatgatgaatct
ttggttgtttttgatgagatcacacgtggagatggaggcatgcacataagaaactgtact
gttgttcgggatcttcctttgttacttgtctcaacagagatagctgtggctcctacagtg
agcagtgattctgatgatagtgatgaagaagaagaggacgaagaaggaggagctaatact
aatgcagacggaatggatatacataaagaagagagtaggagtggagcgaaaatgatgtct
tcacctgaaaattcagtcaagttggtagttgatcgttggcttcctttcagaaccacagcc
cttgaagttgctcaaatgtacattttgcgggaacgactaatggcttctattttgttcaag
gtaacacatccacgtgaacatttgccgcctcatctcggagcttctatgcatgcaatagct
tgtgttctctcgtatgatggtcacgcgggactttcatatccaccggagtctatgggacca
aaacattcgaggactgagatgtatgataccggtggatgggaagagaaaccaagctctttc
ctaaactctctcttttggtctttaagtttgaaagagaacaagcatcctagtcacacgaac
aggaaccggcagcatgactataacatggctccaacagaagctgcatcgatacctaggcag
caaagcaatcagcaaagaaatcccaaatcagccaacaatgctgatttgggcaagaaaaaa
gggaaaatgcttgttaatcccaccaatgggattaattatccagaagctgcttctgtggcg
aagcattcaaagcacaaatcagccaacagttcgagttcgggtaacaagaaagagaacatg
acttctgatcaggccaatggaaagaagcaaccaaacgcacctccaagagaagctgctgcg
tcagtggctaagaatcaaagcactaagaaaaccaagaccaggtcaggcaacaactcagat
tcgggtaagaagaaagaacaatatgttcccaaggtcgatatccataaaaggcagcgtgaa
gacaaagcagaacataagggaaatgcatga |
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