Camelina sativa (false flax): 104704927
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Entry
104704927 CDS
T05044
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104704927
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104704927
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Helicases
104704927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104704927
NCBI-ProteinID:
XP_019083411
LinkDB
All DBs
Position
7:complement(25084979..25090660)
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AA seq
845 aa
AA seq
DB search
MVEGNGFLVSSVTELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMP
LILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFAKE
LGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFD
EADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKI
SPDLKLSFLTLRPEEKYAALLYLVREHISSNEQTLIFVSTKHHVEFVNSLFKLENIEPSV
CYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVG
RAARAGRTGSAYSFVTPEDMPYLLDLHLFLSKPVRPAPTEDEVLKNMEEVMSKTSQAIDS
GVTVYGRFPQKTIDLIFNRIREMVDSSGELDSLERTSAKAFRLYSKTKPSPSKESIRRAK
DLPREGLHPIFRSIIESGELEAMAFFQKIKNFRPKQTVLEAEGEAAKSKNVKGPPGQWVD
VMKRKRAIHEEIINTRHQQKQKSSNNHLEMESEPTTSFGEGAIEGSKVSGKKRKAQESFK
DDDNFISSIPVNHHSEAGLSLRGNEGFASNRLDAAVLDLVADDGQGMTQQKQNFHWDKKS
KKYIKLNNGDRVTASGKIKTESGAKVKANKTGIYKKWKENTHKSAFSRDSGDAGETSSMS
GRGGRDGKRRKGSVPNAHVRSEIKDLEQVRKERQQKANKVSYLQSKRGGRGGARGGRGGR
GGGGRDFGSGSSREFGGGGGRGSGRDFGGRRGSSSTSSRGGKRGGGRGGGGGRGRGGGGK
RGRGR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggaaatggttttttggtgagttcagtcactgagcttcaccggaaagagaaa
cagaagaagaaaggcaaatctggaggattcgagtcactaaatcttggtcctaatgtcttc
aatgcaatcaagaagaagggttacaaagttcctacaccaatccagaggaagacgatgccg
ctcatcctctctggcgtcgatgttgttgccatggctcgaaccggttccggtaaaaccgca
gcttttctgattcctatgcttgagaagctcaaacaacatgttcctcagggaggtgttaga
gcactcatattgtcgcctactcgtgatttagctgagcagactctgaagttcgccaaggag
ctcggcaaatttacagatcttcgtgtatccttactagttggtggagatagcatggaagac
cagtttgaagagttaacaaaaggccctgatgtgatcattgcaactcctgggagacttatg
catcttttgtctgaggttgatgacatgacacttaggacggttgagtatgtggttttcgat
gaggctgatagtctgtttggtatgggttttgctgaacagttgcatcagattctaactcag
ttaagtgagaacaggcagactttgctttttagtgccactttaccaagtgcccttgcagaa
tttgcaaaggctggtttgcgtgagcctcagcttgttcggttagatgttgagaacaagata
agcccggatttgaaactttcgtttttgaccttacgaccggaagagaagtatgctgcattg
ctgtacttggtaagggagcatataagttcaaatgaacagaccttgatatttgtttcgaca
aagcatcatgtggaatttgtcaactcattgtttaagttggagaatattgaaccatctgtg
tgttatggtgatatggatcaagacgcgcgtaagattcatgtatcaaggttcagagcgagg
aagactatgttgttgattgtgacagatattgctgctaggggtattgacataccattgctt
gataatgttatcaactgggatttccctccgagaccaaagatttttgttcatcgtgtggga
agagctgccagggctggtcgtacaggttctgcatattcctttgttacacctgaagatatg
ccatatctgttagatcttcatctattcctctcaaaaccagtcaggcctgcacccactgag
gatgaggtcttgaagaacatggaagaagtaatgagcaaaactagtcaagcaattgatagt
ggagtaaccgtatatggtcgttttcctcagaaaaccattgaccttatcttcaacagaatc
cgagaaatggttgattcatctggagaattagattctcttgaaagaacatccgcaaaagct
tttcgtttgtattcaaaaacaaaaccctcaccgtcaaaagagtccattaggagagcaaag
gatttaccccgagaaggcttgcatcccatcttcagaagcataattgaaagtggggaacta
gaggcaatggcctttttccagaaaattaaaaatttcagacccaagcagaccgtacttgaa
gcagaaggtgaagctgccaaatccaaaaatgtgaagggtccccctggccaatgggttgat
gtgatgaagaggaaaagagccattcatgaggagatcatcaatacgagacatcagcagaaa
cagaagagttccaataatcatttggagatggaatctgaacctacaacctcttttggtgag
ggcgcaatagagggaagcaaagtaagcggtaagaaaagaaaggcgcaagaaagcttcaag
gacgatgataactttatcagctccataccagtaaatcatcattcagaggcggggctatct
ttgaggggtaacgaagggtttgcatcaaataggttggacgctgctgttctagatctagtt
gcagatgatgggcaagggatgacgcagcaaaaacaaaattttcattgggataagaaaagt
aagaagtacatcaagttgaacaatggagatcgagtaacagccagtggaaagataaagaca
gagagtggagctaaagtgaaagcaaacaagacagggatatacaagaaatggaaagagaat
actcacaagtcagcattcagcagagacagcggtgatgcaggcgaaacctcaagcatgtca
ggtagaggtggccgagacgggaagagacggaaaggatcagtgcctaacgcgcatgtgcgt
tcagagatcaaagacctggagcaggtccgtaaagagagacagcaaaaggcgaacaaagtg
tcttatctgcagagcaagagaggtggaagaggtggggccaggggaggccggggcggtaga
gggggcggcggtagagattttggcagtggtagcagcagggaatttggtggtggaggtgga
agaggaagcgggagggattttggaggtcgtcgtggtagtagtagcactagtagtagaggg
ggcaagagaggtggaggacgaggaggtggaggaggaagaggacgaggaggtggaggtaaa
cgtgggagaggaagatag
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