Camelina sativa (false flax): 104705031
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Entry
104705031 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104705031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104705031
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104705031
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
MLD
Motif
Other DBs
NCBI-GeneID:
104705031
NCBI-ProteinID:
XP_010419326
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Position
7:28290239..28295244
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AA seq
790 aa
AA seq
DB search
MFDYGGEGGWRGGLSFPLGRWAEISLFLDGIHPMFQDLCQNDNKKINIGTPENQKGDGSG
CDDIVAHAFNVPIERVNLEDNKRSGRGDSNGKGLANDLRSDENELVEVHARSDKETNISQ
DKGKAILDEAVDGVVDVPIVDVSSENDRPNNHTMGSSSKHVMVDGSSRGGNSSKGLDNNI
CSDGNELVEINKSKDKKKAIFDLNETVWPEDEPFSNIFETCGEIPKDCEHSWIWKEGSGH
VCWICGTIDKDHPLPPGFGSDSSKDVNPGLGTGIYPHPLHQSCMNLRHMEIFNFFCNNLA
VENPNGCILAQAPVSEKIFLLINFIYGYLAKHPDSKVLFVLPKSMSQQLEVLNRWMCNRS
IIFLCGKQFSNIVFKSSGVEVEASKDCRSILVNVPSLVIFDRGTDPKNEMMGVLRDVARI
KTRNKILLTSTLYHNNIKDVFNVVDVAFPEFLRHNQAGKQLSKFLKVESYTHDQPLMDLE
EALLSQDSDHGVKIGYLTELRMLTNKIIYNHNGEFLREDPGLMDFTVVLKPTLSQKSAWE
AEKKSKTKGFKTSSNLSGITLHPVLNAFSDRVKGLPPPKKDEMDEVIKSIDETDGVKTKF
FLGLVKLCDYTNEKIIVVSQYVIPLIFLQRLVAKNKGWEDGKETFMIKGDTSLSAREMSI
NQFNNSHDAKIFFVSIKACNEQMALTGATRVLMLDVISNTCIARQAIELTYRRGQQKKVY
SYRLVAADTSEEDEEIIAARKEIISGIWFDGKTYPVDGKFCIPTIDGSYTNDYLLGASYM
RDDIKTIHKR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattacggtggtgaagggggatggagaggcggtctctcttttcctcttgggaga
tgggcggagatttccttgttcttggatgggatacatccgatgtttcaagacctatgtcaa
aacgacaacaaaaagataaacattgggacaccagaaaatcaaaaaggcgatggaagcggt
tgcgatgatattgtagctcatgctttcaacgtaccaattgagcgtgttaacttggaagat
aataagcgtagcggccgaggtgatagcaatggtaaagggctagcaaatgatttgcgttca
gatgaaaatgaattggttgaagttcatgcgagaagtgataaagaaacaaatataagtcaa
gacaaaggaaaagccattttggacgaagctgtcgatggagtagtggacgtgccaatcgta
gatgtgagttcggaaaatgatagacctaataatcatacaatgggaagctcatctaaacat
gtcatggttgatggtagcagcagaggtggtaacagtagtaaagggctagacaacaatatt
tgttcagatggaaatgaattggtcgaaatcaataagagcaaagacaaaaaaaaagccatc
ttcgacctgaatgaaactgtttggccagaagatgaaccattttcaaacatatttgagaca
tgtggagaaataccgaaagattgtgagcattcttggatatggaaggaaggttctggtcat
gtttgttggatatgtggtaccattgacaaggatcatccgttgccacccgggtttggatcg
gatagctccaaagatgttaacccgggtttaggaactggcatttaccctcacccgttgcac
caaagttgtatgaatcttcgtcacatggagattttcaactttttctgcaacaatttggct
gtggaaaacccaaatggatgcattctagctcaagctcctgtttctgaaaagatattcttg
ctgatcaatttcatctatggttaccttgcgaagcatccagatagtaaagttctctttgtg
cttcccaaatcgatgtctcagcaactagaggttttaaaccgatggatgtgtaaccggagt
ataatcttcttatgcggcaagcagttttccaacatcgtgtttaagagcagtggtgttgaa
gtagaagcttcaaaagattgtaggagtattctcgtgaatgttccttcactggtcatcttc
gacagaggaactgatcccaagaacgagatgatgggcgttcttagggatgttgctcgtatc
aaaacgcgaaacaagattctactcactagcacgttataccataacaacataaaggatgtt
ttcaacgttgttgatgttgctttccctgagttcctgagacataaccaagctgggaaacag
ctctcaaagttcttgaaggttgaatcttacactcatgatcaacctttaatggatttggag
gaagctttgcttagtcaagattctgatcatggagtcaagattggttacttaaccgaacta
aggatgttgacaaacaagatcatttacaatcacaatggagagttccttcgtgaagacccg
ggattgatggacttcacggtggtcttaaaaccgacattaagccaaaagtcagcatgggag
gctgaaaaaaaatccaaaacgaagggattcaaaacatcctctaacttgagcggaatcacg
cttcacccggtgctaaatgctttctcagatcgggttaaaggtcttcccccccctaaaaaa
gatgagatggatgaggttatcaagtcaatcgacgaaacagatggcgtaaaaacaaaattc
ttccttggtttggtgaagttatgcgactatacaaatgagaagattattgtcgtgagccaa
tatgtcatcccattgatatttctccagaggcttgtggctaagaataaaggttgggaagat
ggcaaagaaaccttcatgattaaaggtgacaccagcctttctgctcgtgaaatgtcaatt
aatcagttcaacaactcgcatgatgcgaaaatcttctttgtgtcaatcaaagcatgtaat
gagcagatggctcttacgggtgcaacaagggttttaatgctcgacgtcatctccaacact
tgtattgctcgacaagccatagagctgacgtatcgtcgaggacagcagaagaaagtttat
tcctacaggctggtggctgcggacacatcagaagaagacgaagagatcatcgcagctcgg
aaggagatcatttctggaatatggtttgatgggaagacttatcccgttgatggcaaattt
tgtattccgaccatcgatggaagctacaccaatgactacctccttggagcttcttatatg
agggacgacatcaaaaccatacacaaaaggtaa
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