Camelina sativa (false flax): 104705078
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Entry
104705078 CDS
T05044
Name
(RefSeq) protein strawberry notch-like
KO
K26273
protein strawberry notch
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104705078
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104705078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
PHD
ResIII
DUF349
PHDvar_NSD
PHD_4
Zot
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104705078
NCBI-ProteinID:
XP_019082728
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All DBs
Position
7:complement(29604959..29617034)
Genome browser
AA seq
1287 aa
AA seq
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MTQPPVQPPPPLPAPPHSAAAGGALRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQML
PPELLSRARPQFPQSQQPPQPQPIQTLPPQIQQQLKPPLNLPRPPVPAHGIDPTKMQLPC
ANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTAPHSHPNPPTPAAPPVPPPPPPE
EVNEEAIEVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYDLK
IKEELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAGLIWENW
KHGRRKALWISIGSDLKYDARRDLDDVGATSVGVNPLNKLPYSKLDSKNVGVKEGVVFLT
YNSLIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQAVVDIQ
DKIPQARVLYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGALDKGGTGALELVAM
DMKARGMYVCRTLSYKGAEFEIVEARLEEGMEAMYNKSAEFWAELRIELLSASAFLPNEK
PNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSTNKCVVIGLQSTGEARTEEAV
TKYGLELDDFVSGPRELLLKFVEENYPLPEQPEPLSEDDNVKELQRKRHSASPGVSIRGR
VRKMAKWKPDSDDESDLESEAESADDSNDSDDEFQICQICSGEDERKKLLHCSECDKLFH
PDCVVPPVTDLLSEAWICYSCKEKTEEYIQARRLYIAELQKRYEAALERKLKIIEIIRAL
NLPNNPLDDIVDQLGGPDKVAEITGRRGMLVRASNGKGVTYQARNTKDITMEMVNMNEKQ
LFMDGKKFVAIISEAGSAGVSLQADRRAINQKRRVHLTLELPWSADRAIQQFGRTHRSNQ
TSAPEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLSAYNYDSNFGKKS
LMVMYRGIMEQEKLPVVPPGCSVDEPETIKEFLTKARAALVAVGIVRDSVLANGKDVGKF
SGRIIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTNILDVLVHNARIEGSFDSGIVDMKA
NSVELLSTPKTVHVDQMSGASTMLFTFTLDRGVTWESASSMLEGKRRDGLGSANDGFYES
KREWLGKRHFILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWED
EYEVSSKQCMHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKALSKQSRHSHKRXS
SLSFPSRKPEANFPSVPISPPSSPFPD
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagccgcctgttcaaccgcctccgccgcttcccgctccgccgcattccgccgcc
gccggtggtgcattaagaggcgatgttcaggttcggtgcgctggctgtcgcgtgattctt
agggtgaagaccggcgttgttgagttctcttgtcccacttgtcaacttccccaaatgttg
ccgccggagcttctttctagggcacggccgcagtttccgcagtctcaacaaccgcctcaa
ccgcagccgattcagacgcttccgcctcagattcaacagcagcttaagcctcctcttaat
ttacctaggcctcccgttccggctcacggaatcgatccgaccaagatgcaattgccttgc
gctaactgtcaggctatcctcaatgtgccacatgggctcactcgcttctcttgtccgcag
tgccatgtcgagctcgctgttgatgtctccaagcttaatcgttctttaactgctcctcat
tctcatcctaatcctcctactcctgctgccccgcccgttcctcctccgcctcctcccgaa
gaagtcaatgaggaagctattgaagtggagagagaagaagatgaaggtggaacggcagga
gaaacgtttatggattatcgtcccccaaaactttcaatcggccctcctcatcctgatccg
attgtggagacatcatctctatctgcagtgcaacccccagagcccacttacgatctcaaa
atcaaggaagagctcgaaaggtcaaaggctttatcgtgcttgcagattgagacattagtt
tacgcttgtcagaggcatctccagcaccttgctgatggtaccagagcaggcttttttgtt
ggagatggtgctggtgtggggaaagggcgaacaattgccgggttgatatgggaaaactgg
aaacatggaaggaggaaagctttgtggatttctattggctcagacttgaagtatgatgca
agaagggacttggatgatgtgggtgccacatccgttggagtgaatcctttgaacaagcta
ccttattcgaagcttgactcaaaaaatgttggtgttaaagaaggagtggtattcttgaca
tacaatagcctcattgcttcctctgagaagggccgttctcgtttacagcagcttgttcaa
tggtgtggaccagaatttgatggtctcttgatctttgatgagtgccataaagcgaaaaat
ttggtacctgaagctgggagtcagccgacacgcatcgggcaggcagttgttgacattcag
gataagatcccccaagcacgtgttctttattgctctgctactggtgcatcagaaccacga
aacatgggttatatggtcaggcttggtctttggggagctggaacaagtttcagtgatttc
aacaaatttttaggtgcccttgataaaggtgggacaggagcgttggaattggttgcaatg
gacatgaaagcgagggggatgtatgtatgccgaaccctgagctacaaaggggctgagttt
gagattgttgaagctcgtttagaagaaggaatggaggcaatgtacaataagtctgcagaa
ttttgggcagagctacggatagagttgttgtcagcaagtgcttttctccctaacgagaaa
ccaaattctagtcagttgtggagattatactggtcaagccaccagcgtttctttagacac
ttatgtatgtcagctaaagtccctgtaactgtgagattagcgaagaaagccttgtcgaca
aataagtgtgtggttattggccttcagagtaccggagaggctcgaaccgaagaggcagta
actaaatatggtcttgagcttgatgattttgtctcgggacctcgagagctcttgttgaaa
tttgtggaagagaattatccattgccggagcagcctgaacctctgtcagaggatgataat
gttaaagaacttcagagaaagagacattcagcttcacctggtgtttcaattagaggaaga
gtaagaaagatggcaaagtggaaaccagatagtgatgatgaaagtgatttggagtctgaa
gctgagtctgctgacgattctaatgattctgatgatgagttccagatatgtcagatatgc
agtggggaagatgaaaggaagaagttgctccattgttctgaatgtgacaagctttttcat
ccggactgtgtggttcctccagttacagacttgctatctgaagcgtggatatgctattct
tgcaaggaaaagacagaggagtacattcaagcaagacgtctctacattgcggaattgcag
aaaaggtatgaagcagcgttggaacgaaaattaaagatcatagagattatccgtgccctg
aatcttccaaacaatcctttagatgacattgtcgatcagcttggaggccctgacaaagtt
gcagaaataacaggcaggcgaggtatgcttgtaagagcatctaatgggaaaggcgttacg
tatcaagcaagaaacacaaaggatatcacaatggaaatggtcaacatgaacgagaaacaa
ctatttatggatggtaaaaagtttgttgccattatttctgaagctggttcagctggtgtt
tcgttacaagcagatagaagggcaataaatcagaaaagaagggttcacttgactttagag
cttccctggagtgctgatcgtgcaattcaacaatttggaagaactcaccggtcgaatcag
acatcggctcctgaatataggttactcttcacaaatctcggtggggaacgccggtttgcc
tctatagttgcaaagagactagaaactcttggtgctttaacacagggagaccgcagggct
gggccctccgggccttctttgagtgcctacaattatgatagcaactttggtaaaaagtcc
ttgatggtgatgtatagaggaataatggagcaggagaaactacctgttgttcctcctgga
tgctcggttgatgaacccgaaacaattaaagagtttttgaccaaagcaagggctgccctt
gttgcggttggaattgttagggacagtgttctagccaatgggaaagatgttggaaagttt
tcaggacgcattattgattctgacatgcatgacgttggacgatttctgaatcgcctcttg
ggattgccacctgatatccagaataggttgtttgaattgtttactaatatattagacgtt
cttgtacataatgctcggatcgaaggaagttttgattcaggaattgtggatatgaaagct
aatagtgttgagctgctgagcactccaaagaccgtccatgttgatcaaatgtctggtgcc
tcaactatgctctttacttttactctggatcgtggtgttacatgggagtctgcaagttca
atgctagaggggaagagaagggacggacttggttctgctaatgatggcttttatgaatct
aaaagggaatggttaggaaaacgacacttcatattagcatttgagagtgcggcttccggg
ttgtttaagattgttcgtcctgctgtaggagagtcaatcagggagatgtctctttcagag
ttgaaaactaaataccgaaaactctcatctctggagaaggctcggactggttgggaagac
gagtacgaagtttcttctaaacagtgtatgcatggacccaagtgtaagctgggcgagtat
tgcacagttgggcgaagaatacaggaagtaaacgttgtgggtggcctcattcttcccatc
tggggaaccatagagaaagctctctcgaaacaatcccgtcatagccacaagagagnctca
tcgttgagcttcccctcaagaaaacctgaagccaactttccaagcgtacccataagccca
ccttcttctccatttcctgattga
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