KEGG   Camelina sativa (false flax): 104705726
Entry
104705726         CDS       T05044                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
csat  Camelina sativa (false flax)
Pathway
csat03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104705726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104705726
   03036 Chromosome and associated proteins [BR:csat03036]
    104705726
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     104705726
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     104705726
    COMPASS/SET1 complex (yeast)
     104705726
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_SPT8 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd PAC11 Beta-prop_Aladin Beta-prop_NUP159_NUP214 WD40_RFWD3 WD40_MABP1-WDR62_1st DSE1_N NBCH_WD40 Beta-prop_NOL10_N Beta-prop_ACSF4 Tricorn_2nd TRM82_WD WD_LRWD1 PD40 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 104705726
NCBI-ProteinID: XP_010420093
UniProt: A0ABM0T2V9
LinkDB
Position
8:complement(2344938..2347393)
AA seq 334 aa
MSLTELDDGIVRRMAIGAVFSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLK
ITYHKKHGTDRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSL
CMSPINDSFMSGSLDKSVRLWDLRVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKL
FDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSL
EPSQGTSIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAM
FVAASTVLTFWIPNDGEPPVPADRSAADQQPPPQ
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgtcgttgacggagctagacgacggaattgtccgcaggatggccatcggcgcagtcttc
tctgatttcggagggaagatacattcagtgggtttccataggaccgatgacctactggtt
acatccagcgaagatgattcacttcgcctcttcgatatcgccaacgctaaacagctcaag
attacataccataagaaacatggtaccgatcgtgtatgctttactcatcatcccagctct
cttatttgctcttctcgatacaatttggagtctactggagaatccttgagatatctttca
atgtatgataatcggatccttcgctactttaaagggcataaagacagggttgtatcgctt
tgtatgtctccaataaatgatagcttcatgtctggttctctcgacaagagtgtcagactc
tgggatcttcgtgttaatgcctgccagggaattctacatcttcgtggtaggcctgcagtt
gcctatgaccaacaaggcctggtgtttgctattgcaatggaaggaggtgctgttaagttg
tttgattcccggtgttatgacaagggtccctttgacacatttctggtaggtggggatacc
gctgaggttaacgatataaaattcagcaacgatgggaaatccatgctcctaacaactaca
aacaacaatatctacgttcttgatgcatatcgtggagagaagaaatgtggttttagtttg
gagccttcacagggtacatccatagaagccaccttcacaccagatggcaagtatgttctg
tcaggttcaggagatggaaccttacatgcttggaacatcgagaacccatctgaggtggcg
aggtgggagaacaatataggagtagtgtcgtgtttgaaatgggcacctcgtagagccatg
tttgttgctgcttcgactgttctcacattctggatacccaacgatggcgagccgccagtt
cccgccgatcgtagtgctgctgaccaacaacctcctcctcagtga

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