Camelina sativa (false flax): 104705786
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Entry
104705786 CDS
T05044
Name
(RefSeq) probable pectate lyase 19 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104705786
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104705786
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104705786
NCBI-ProteinID:
XP_010420164
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Position
8:2640313..2643903
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AA seq
472 aa
AA seq
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MEMARLLKLMFMFCIAGLIPTIRGNISELDEYWSRRADEAREFTLQAYHSDPYEIVDHFH
ERHYDNSTDATETEEDGGAKPEEEEEEGIKMVGNSTKSTRRSLRGKGKGKWSKLKGPCTA
SNPIDKCWRCRTNWAKRRKKLTRCVRGFGHRTTGGKRGRIYVVTSNLDEDMVNPKPGTLR
HAVIQKEPLWIIFKNDMSIRLSQELLINSHKTIDARGANVHIAHGAGITMQFVKNVIIHG
LHIHHISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWLDHISMSKCQDGLIDAIVG
STGITISNSHFTHHNDVMLLGAQNTNEADKHMQVTVAYNHFGKGLVQRMPRIRWGFVHVV
NNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKPHYREVTKRDYAPEDEWKHWIWRSEKD
VFMNGAYFRQSGNPHFKCAHTRKQMIKPKNGMAVSKLTKYAGALDCRVGKRC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctaggttgttaaagttgatgtttatgttttgtattgccggtctgattccg
accatacgaggcaacatttctgagttggacgagtattggtcgcgacgagccgacgaagcc
cgagaattcactctacaagcttatcattctgatccttacgaaatcgtcgatcactttcat
gagcgtcattacgacaactctactgatgctacggagaccgaggaagatggcggtgcgaag
cctgaagaggaggaagaagagggtattaaaatggtcggaaactcgacaaagagcacgaga
cgaagcctaagaggtaaaggcaaaggaaaatggagtaagcttaagggaccttgtaccgca
agtaacccgatagataaatgttggcgttgccgtacgaattgggccaagcgtcgtaagaag
cttacacgctgcgtccgagggttcggccacaggacgactggaggaaaacgcggacgcatc
tatgtggtcacaagcaacctcgacgaggacatggtgaacccgaaacccgggacattgcgt
cacgccgtaatccagaaggaacctctctggatcattttcaagaacgatatgagcattcgt
ttaagccaagagcttctgattaatagccacaagacgattgatgcacgaggagctaatgtc
catatcgcgcatggcgcagggatcacgatgcagtttgtgaaaaacgtcatcatccatgga
ttgcacattcaccacatttccgagagtagcggtggtatgatccgagactcggtagaccat
ttcggaatgaggactagagccgatggagacggtttatcgatttacggttcgtctaacatt
tggcttgaccatatttcgatgtcaaaatgtcaagatggactcattgatgccatcgttgga
tccactggcattacaatctctaactctcacttcacccaccacaacgatgtgatgttgctt
ggtgcgcaaaacacgaacgaagcggacaagcatatgcaagtcacagtggcctataaccat
tttggtaaaggacttgtacagaggatgcctaggatccgatggggatttgttcatgttgtg
aacaacgactacactcattgggagctttacgcaattggaggtagtcaaggtccaacaatt
ctcagccatggaaaccgattcatagctcctccacacaaacctcattacagagaggtgaca
aagagggactatgctccggaggacgagtggaaacactggatctggagatccgagaaagat
gtattcatgaacggagcttatttcagacaatctggtaaccctcatttcaaatgcgcacac
actaggaaacaaatgatcaaacccaaaaatggaatggctgtttctaagctgaccaagtac
gctggagcacttgattgcagagtcggaaaacgctgttag
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