Camelina sativa (false flax): 104705817
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Entry
104705817 CDS
T05044
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csat
Camelina sativa (false flax)
Pathway
csat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104705817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
104705817
Ion channels [BR:
csat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104705817
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TMEMspv1-c74-12
IQ
Motif
Other DBs
NCBI-GeneID:
104705817
NCBI-ProteinID:
XP_010420197
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Position
8:complement(2811942..2815236)
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AA seq
718 aa
AA seq
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MPSHPDFIFRWIGLFSEKFRRQTTGIEENNGGDSTYSGSDETPVLSSVECYACTQVGVPA
FHSTSCDQAHAPEWRASAGSSLVPIQDGSSVRARVRRLKGPFGEVLDPRSKRVQRWNRAL
LLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVLRTFLDAVHLWHVWLQFRL
AYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWFDVIVILPVPQTVFWLVVPKLIREEK
VKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVAG
GCWYVLAIQRVASCIREQCMRAGKCNLSLACKEEVCYQFVSPTSTFGYPCVSGNLTSVVN
KPMCLDSDGPFRYGIYRWALPVISSNSLAVKILYPIFWGLMTLSTFANDLEPTSNWLEVV
FSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRR
FERQRWNALGGEDELELIQDLPPGLRRDIKRYLCFDLINKVPLFRGMDDLILDNICDRAK
PRVFSKDEKIIREGDPVQRMIFIMRGRAKRIQSLSKGVVATSMLEPGGYLGDELLSWCLR
RPFTDRLPPSSATFVCLDNIEAFSLGSNDLKYITDHFRYKFANERLKQTARYYSSNWRTW
AAVNIQMAWRRYRKRTRDGGGNGSMSPVSENSVEGNSERRLLQYAAMFMSIRPHDHLE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcaccccgacttcatcttcaggtggattggactgttttccgagaaattccgt
cgacaaacgactggaatcgaggaaaacaacggcggagattcgacctacagcggcagcgat
gaaacgccggttctgagctccgtcgagtgttatgcttgtactcaagtaggtgtcccagct
ttccattcaactagctgcgatcaagctcacgcgccggagtggcgtgcctccgctggctct
tctctagttccgatccaggatggatcctctgtccgagctcgcgtcagacgtctcaaaggt
ccgttcggcgaagttctcgatcccaggagcaagcgcgtgcagagatggaaccgcgcgttg
cttctagctcgcgggatggctttagcggtggatcccctcttcttctacgcgctctctata
ggtcgaaccaccggaccggcgtgtctttacatggacggcgcgttcgccgcggtggtcact
gtgctccgcacgtttctcgacgctgttcatctttggcacgtgtggcttcaattcagactg
gcttacgtctcgagagagtcgcttgtcgttggttgtggcaagctcgtttgggatccacgc
gccatcgcgtctcactacgcacgctccctcactggcttctggtttgatgttattgtcatc
ctccctgtgcctcagactgtgttttggttagttgtgccgaaactgataagggaagagaag
gttaagttgataatgacgattcttctgctaatattcttgttccaattcctccccaagatt
tatcactgcatttgcttgatgagaaggatgcaaaaagtcactggctacatttttgggact
atttggtggggttttgctcttaatctcatcgcatatttcatcgcttcgcatgttgctggg
ggatgctggtatgttctcgcaatacagcgtgttgcttcttgcataagagagcaatgcatg
agagccgggaaatgcaatctgagtctggcttgcaaagaagaggtctgttaccaatttgtg
tcaccgacaagcacatttggatatccatgcgtatctggaaaccttaccagtgtggtcaat
aagcctatgtgcttagactctgacgggccattccgatatggtatctaccgttgggcactt
ccagtcatctccagcaactctcttgcggttaagatcctctaccctatcttctggggccta
atgactctcagcacatttgcgaatgatcttgagcctacaagcaactggctcgaagttgtt
ttcagtatagttatggtccttagcgggttattactcttcacgctattgatcggaaacatt
caggtgtttttacatgcagtaatggcaaaaaaaaggaaaatgcagatacggtgtagggat
atggaatggtggatgaaacgtaggcagttaccttcccggttaagacagagagttaggcga
tttgagcggcagagatggaatgccttgggtggagaagatgagctagaacttatacaagat
ttgcctccaggtcttcgaagagatatcaaacgatatctttgctttgatctcattaacaag
gtgccattgttcaggggcatggacgatttgatcctcgacaacatttgcgatcgggcaaag
cctcgtgtcttctctaaagacgaaaagatcatccgtgaaggagatcctgtacagagaatg
atattcatcatgcgtgggcgagccaaacgtatccagagcctaagcaaaggggtagtagcc
acaagtatgctcgaaccagggggttacttaggagacgagctactgtcgtggtgcctacgc
cgtccatttactgaccggcttcctccttcatcggcaacatttgtctgcctcgacaacatc
gaggcattctccctaggatccaatgatcttaagtacataaccgatcatttccgttacaaa
tttgcgaacgagcgtcttaagcagacggcaagatactattcgtcaaactggaggacgtgg
gcagccgtaaacattcagatggcgtggcgccggtacaggaaaagaactcgtgacggtggt
ggaaacggttcgatgagtcctgtgtcggagaatagcgttgaaggtaacagtgaacgccgg
ttgcttcagtatgccgcgatgttcatgtccatccgacctcatgatcatctcgaataa
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