Camelina sativa (false flax): 104705955
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Entry
104705955 CDS
T05044
Name
(RefSeq) DNA repair protein RAD4-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104705955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104705955
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104705955
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
104705955
NCBI-ProteinID:
XP_010420362
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Position
8:3480847..3485584
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AA seq
884 aa
AA seq
DB search
MKSTSDSKDGRLSAASRAAVNKILDRRTSRGKKKQDDNFDSSKRDKSVNDKGKQAVKATL
TDNVLKGRECVTIVLSDDDEMNDSDWEDCPIPSLDNTVDANVDDTVDASVDDTVDASVDD
TRELTIEFDNDVPDAKKQKGAYRATAKDKERAELVHKVHLLCLLARGRIVDNACNDPLIQ
AALLSLLPSYLSKVANIEKVTVRDVAPLLRWVRENFSVRCTPCSEKTFRTSLAFALESRK
GTAEELAALSVALFRALKLTTRFVSILDVASLKPGADKDESTGQNRGKMKHGVFRTSTLM
VPKQQAISSYPNKSSSHVEHKSVCETSEPQHRNSLRSDQLQHNTVNSSCEAGTSSKSGGT
KRKGDVEYEMQIAMALSATADNQQRSKVNEKMKIRKITKIIDGPSVSDQLISTAIGSKKV
DSPLCWAEVFCNGENMDGKWVHVDAVNGVIDAAQNVEATTTACKTSLRYVVAFAGGGAKD
VTRRYCTKWHTISSKRVCSVWWDMVLAPLIHLESAATHNEDTALRNFNSLYPVANRVSLS
SSSYGIRSALEDMELATRSLTEPLPTNQQAYKTHELYAIEKWLHKNQIFHPKGPVLGFCN
GHSVYPRTCVQTLKSKERWFRDGLQLKANEVPSKILKRNSKFKKVKDFGDGNGEIRGGSY
CMELYGKWQMEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTVHLKLPRIFSVAKRFGI
DYAPAMVGFEYRSGGATPIFQGIVVCTEFKDTILEAYAEEQEKREEEERRRNEAQAASRW
YQLLSSILTRERLKNRYANNSNSVETKSLEVNSVPIIKAKNVKSPEKQSVAKTGGGGRSR
VRKNRNEDESHEHVFLEDQETFDEETSVKTKRCKCGFSVEVEQM
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctacaagtgatagtaaggacggtagactctcagcagcctctagagctgcagtg
aacaaaattctagacagacgaacttctcgaggcaagaagaagcaagatgacaactttgat
tcctcaaagcgggataaaagtgtaaatgacaaggggaagcaagccgttaaggcaacttta
actgataacgttctaaagggcagggaatgtgttactattgtactctcggatgatgatgaa
atgaatgattcagactgggaagactgtccaattcctagtcttgataacacggttgatgct
aatgttgatgacacggttgatgctagtgttgatgacacggttgatgctagtgttgatgac
actagagagttaaccatagaatttgataatgatgttcctgatgctaagaagcagaagggt
gcataccgtgcaacagcaaaagacaaggaacgggcggaacttgtacataaggttcacttg
ctctgtctgctcgcaagagggaggatagttgataatgcttgtaatgatcccttgattcag
gctgccttgctttcacttctgccatcatacttatcaaaagtagcgaatatcgagaaagta
actgtcagggatgtagcccctcttcttcgttgggttcgtgaaaacttttccgttaggtgt
actccctgttctgagaaaacttttcgtacttccctagcatttgctcttgaatctcgtaaa
ggcacagctgaagagcttgcagcactgtctgttgctttgtttagagcattaaagctcaca
actcggtttgtgtctattcttgatgttgcatccttaaaaccaggggccgataaggacgaa
tcaacaggtcaaaaccgaggtaaaatgaagcatggggtattcaggacctcaacgcttatg
gtaccaaaacagcaggccatctcgtcatacccaaataaatcttcttcccatgttgagcat
aaaagtgtctgtgaaacgtctgagcctcagcataggaactccctgcgatctgatcagttg
caacacaatacagtcaattcatcttgcgaagcaggaacgtctagtaaatctggtggaaca
aagaggaaaggagatgtagagtacgagatgcaaatagccatggctttgagtgcaactgca
gacaaccaacaacgctctaaagtgaacgagaaaatgaaaattcgtaaaataacaaaaata
attgatggcccgtcagtttctgaccaactaatatccacggctatcggttctaagaaagta
gattctcccctttgttgggctgaggtgttctgcaatggggaaaacatggatgggaaatgg
gtccatgtggatgctgttaatggagtgatagatgcagcgcaaaacgttgaagctacaact
accgcttgcaaaacctctcttagatatgttgtcgcttttgctggtggtggagccaaagat
gttactcgcaggtactgtacaaaatggcacactatttcatccaaaagggtgtgttcagtg
tggtgggatatggtattagcaccgttaatacatctagagtcagccgcaactcacaatgaa
gacactgctctgagaaatttcaatagtctatatcctgttgctaacagagtttccttaagt
agctcttcctatggtataaggagtgctcttgaagatatggagttggctacgcggtcgttg
actgagccgcttcctactaaccaacaggcctataaaacccatgaactctatgctattgag
aaatggcttcacaagaaccagatatttcacccaaaaggtccagttctggggttttgcaat
ggtcattcagtatatcctcgaacctgtgtgcagactctcaaatcaaaagaaaggtggttt
cgtgatgggctacaacttaaggcgaatgaagttccctcaaagattctgaagcggaactcg
aagttcaagaaagtaaaagattttggagatggcaacggtgaaattagaggtggttcttat
tgcatggaactatatgggaagtggcaaatggaaccattgtgtctcccacgcgctgttaac
ggaattgtgcccaagaacgagcgcggtcaagttgatgtctggtctgagaaatgtctccca
cctggaacagtccacctaaagcttcctagaatattttcggttgctaagagatttggtata
gattatgcacctgccatggttggtttcgagtacagaagtggaggtgctactcctattttt
caaggtattgtggtctgtaccgagttcaaagacacaatcctcgaggcatatgcagaagaa
caagaaaagagagaagaagaggagagaagaagaaatgaagcacaagcagcttcaagatgg
tatcagcttctttcgtctatcttaacccgtgaaagattgaaaaaccgttacgctaataac
tctaacagtgtcgaaacgaagagtttggaagtgaattcagtgcctatcattaaggccaag
aacgtgaaatcacctgaaaagcagagtgtggctaagactggaggaggaggaaggtcacga
gtaagaaagaatcgtaatgaagacgaaagccatgagcatgtgtttcttgaggaccaagaa
acctttgatgaggaaacctctgtgaaaacaaaacgctgcaaatgcggcttttctgtcgaa
gttgaacaaatgtag
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