| Entry |
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| Name |
(RefSeq) protein PIR-like
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| KO |
| K05749 | cytoplasmic FMR1 interacting protein |
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| Organism |
csat Camelina sativa (false flax)
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| Brite |
KEGG Orthology (KO) [BR:csat00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csat03019]
104706147
Messenger RNA biogenesis [BR:csat03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104706147
Factors involved in mRNA localization
Other mRNA localization factors
104706147
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(4606961..4615909)
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| AA seq |
1282 aa
MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKA
LNQLNTLIQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRLINIFKNDPVI
PAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGAL
RAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCRDAGETPEASGSYSDYEKVVRYNYTTEERKALVELVGYIKSVGSMLQRCDT
LVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEI
PSSQHGSDESRANFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVN
DLKQLETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLI
DYILEAQNSGLLESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSES
IFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQR
MNKIFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDLSIDPFSLMLNEMQEN
ISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGT
QDLNAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGL
QEAMPKSIGLLSFDGGVTGCMKLIREQLNWGSKSELKSEVLRGIKEIGSVIYTMGLLDIV
LREIDTKRFMQTAPWLGLIPGAEGQIVNAQDGESPLVNLLKSATSAVVSRPGCLNPAAFY
TMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFIDITTSKDFYR
IYGGLQIGYLEEVPAPQSAQHEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEV
ETVSASHTHRNPQIHQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPL
PRVRFENTVSAFETLPQKGTVG |
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| NT seq |
3849 nt +upstreamnt +downstreamnt
atggcggttcctgtagaagaagcaatcgcagctctttccacattctccttggaggatgag
caaccagaagtccaaggaccggctgtgatggtttcagctgaaagagcagctactgatagt
cccattgagtatagtgatgttgcagcataccggttgtctctctcagaagacacaaaagct
cttaaccagctgaatacacttattcaagaaggaaaagagatggcgtcaattctatacaca
tatagaagttgtgttaaagcactacctcagcttcccgaatctatgaagcatagtcaagcg
gatttgtatctagaaacatatcaggttttggacttagaaatgagtcgtttacgcgaaatt
cagagatggcaatcgtcggcttcagctaaattagctgctgacatgcagcggttttccaga
cctgaacgacgcatcaatggccccacagtcacacatctttggtcgatgctaaagttgctt
gacgtcttggttcagctggatcatcttaaaaatgctaaagctagcattcctaatgatttc
tcttggtacaagagaacatttactcaagtcagtgcgcagtggcaagatacagatacaatg
agagaagagttagatgacttacagattttcctgagtacacgatgggctattttactgaac
ctgcatgttgagatgttccgtgtaaacaatgtggaagatattctccaagttctcatagtc
ttcatcgtggagtctctggagttggattttgcactactttttcctgagcgttatattctt
cttcgagttttaccggttcttgttgtcctagcaacaccatctgagaaagataccgaggct
ttgtacaagagggtaaaactgaacagattgataaacattttcaagaatgatcctgtcatt
cctgcgtttccagatctccatctttctcctgctgcaattttaaaagaattgtcggtatac
tttcaaaagttttcatcacagactcgccttctgactcttccagcacctcatgagctccct
ccacgtgaagcgctagaatatcagagacactatctgatagtcaatcacattggagctctt
cgcgctgagcacgatgatttcacaatccgatttgcatcatccatgaatcagttattgctg
ttgaagtcaaacgatggagcatatactgaatggtgcagagaggtcaaaggaaatatgtac
gatatggttgttgaaggcttccaactgttaagtagatggacagcgcgcatttgggagcaa
tgtgcttggaaattctctcgcccatgtagggatgcaggagagactccggaagcctccgga
tcatactctgattacgagaaggtggtgaggtataattatactacagaagaaaggaaagcc
ttggtcgaacttgttggctatataaagagtgtaggatcgatgctgcagcgttgtgacaca
ttagttgcagatgctttatgggagacaatacatgccgaagttcaggattttgtacagaac
acattagctacaatgttgcgtaccaccttccgaaagaagaaagatctctcaaggattctt
tctgatatgcggacactctcagctgattggatggcaaataccaggcccgaacatgagatt
ccatcttcacaacatggaagtgatgaaagcagagcgaatttcttttatccaaggccagtt
gccccaacagcagcacaggtgcattgcttgcagtttctgatttatgaggttgtctctggt
ggaaatctgaggaggccagggggattctttggaaataatggctctgagattcctgttaat
gacttgaagcaattagaaactttcttttacaagctcagctttttcttgcacatattagat
tactcggcaagtattgggattctgactgatctggggttcctgtggtttagagaattttac
ctagagtcttcacgtgttattcagttcccgattgagtgttcactaccatggatgttgata
gactacattctggaagcccagaattcaggccttcttgagagtgttctgctgccttttgac
atttataatgactcagctcaacaagctctggttgttctgaggcagagatttctctatgat
gaaattgaagctgaggtggaccatggttttgatatatttgtttcaaggctttcggagtct
atattcacatattacaagagttggtcagcgagtgagcttcttgatccatcatttctcttt
gcgttggacaatggtgaaaagttctccatccagcctgtgaggtttactgcgttatttaaa
atgacaaaagtaaagatacttggtagaacaattaatttaagaagtttgatcgctcaaagg
atgaataaaatctttagagagaacctggagtttctttttgaccgttttgagtctcaggat
ctatgtgctgtagtggaattggagaagctgatagatatcctaaagcactcgcatgaattg
ctttcacaagatctttccatagatcctttcagcctcatgttgaatgaaatgcaagaaaac
atttctcttgtctcattttcaagtcgacttgctacacagatctggtcagagatgcagagt
gatttcctaccaaacttcattctttgcaataccacacagcgatttgtccgttcatcgaaa
gttcctcctactcagaaaccatcagtgccttctgctaagcctagtttctattgtggtact
caagacttaaatgcagctcatcaaagttttgcacgattgcatagtggattttttgggata
ccacatttattttccatagttaaacttcttggatccagatcattgccttggctaataaga
gctttgctggaccatatatcaaataagataactacacttgagccaatgatctctggattg
caagaagcaatgcccaaatctattggattgctttcttttgatggtggtgttacaggttgt
atgaagcttatacgagagcaactaaactggggcagtaagtcagaactcaagtcagaagtt
ctacgaggaataaaggaaattggaagtgttatatatacaatgggacttctcgatatcgta
ttgagagagatagacacaaagcgtttcatgcaaacagctccatggttgggattaatcccg
ggtgctgaaggacagatagttaatgctcaagacggtgaaagccctcttgtcaatctctta
aagtcagcaacttctgcagttgtgtcacgtcccggttgtcttaatccagcagcgttctat
acgatgtccaaacaggcagaagctgcagatcttttgtataaggcgaacatgaacggtgga
agcgttcttgaatacacacttgcattcacaagtgcgtcactcgacaaatattgtagtaaa
tggagtgctcctccaaagacaggcttcattgatatcacaacttcaaaggatttttaccgt
atatacggtggtctgcagattggatatctggaggaggtaccagctccacagtcagctcaa
catgaagtgcttggtgattcgatagcttggggtggttgcaccattatatacttgctcggc
cagcaacttcactttgagttgtttgatttctcgtaccaagtactcaatgtctctgaggtt
gaaactgtctctgcttcacatactcataggaatcctcagatccatcagggatgggaaggt
ttgttggaagggatgaagaaagctcggaggctgaataatcacgtcttctccatgcttaaa
gctcgttgccccctagaagacaaaacggcttgtgctatcaaacagagcggcgcgccgctg
ccacgtgtcaggtttgagaatactgtatctgctttcgagactctacctcagaaaggcacc
gttggctga |
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