Camelina sativa (false flax): 104706152
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Entry
104706152 CDS
T05044
Name
(RefSeq) GATA zinc finger domain-containing protein 14-like isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104706152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104706152
03019 Messenger RNA biogenesis [BR:
csat03019
]
104706152
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104706152
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104706152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
MXRA7_helical
Motif
Other DBs
NCBI-GeneID:
104706152
NCBI-ProteinID:
XP_010420604
UniProt:
A0ABM0T437
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All DBs
Position
8:4629301..4632619
Genome browser
AA seq
481 aa
AA seq
DB search
MRPPFNSFQPQGRPHRPQQQQHQNNGYSNHHQRNGYQNPMEANQLRMMNPHMMSNPMMGH
MNNPMPMPNMPMHPQFFNNLPNMPQHQQQLHQFAAMPNHINQLLPNLLGNLQFAVANSNL
MAHSLPLVQPQFFQPQLNSFNPRPYPPVPNPHQNHQLQPPGFSEPRPLGQTGGIVDNTNG
SGSKGNDFRNKFTKHQKFKGPGQGFQRSQLHKADNGKRKSGFKDHKGKGNYNKMTTGFNG
SDAGNIPNEKKRSFALVYTPKEIKQWRESRRKNYPTKLNVAKKVKKNVSESILDEEAKMR
RQQLQEVLAKQAELGIEVAEVPSHYLSNTDEQVNGDRGNNNGKNQYNDRKKGRFQNNRYK
KRRLDRKDKSGKKTRFEDKTSSQESSVITREPTLLEKLLSGDIKRDKSQLLQVFRFMVMN
SLFKEFPEQPLKLPLITVEETGCEHAREDEVSLCDDLSDDDDDDDDVDVNGDDNSCDEDV
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctccattcaattccttccagcctcaaggtcgacctcatcgaccgcaacagcaa
caacaccagaacaatgggtattctaatcaccaccaacgtaatgggtatcagaacccaatg
gaagctaatcaattaaggatgatgaatccacacatgatgagtaatccaatgatgggtcac
atgaacaatccgatgcctatgcctaatatgccaatgcatcctcagttctttaataatctc
cccaatatgcctcaacatcaacagcaacttcatcagtttgctgctatgcccaaccatatc
aaccagttacttcccaacctcttggggaatcttcaatttgcagttgctaatagtaatctt
atggctcactcactccccttagttcagccccaatttttccagccacagcttaattccttt
aacccccgtccttatccaccagttccaaatccccatcaaaatcatcagttacagcctccg
ggtttctcagagccaagaccactggggcagaccggaggaattgttgataataccaatggt
tccggctctaaagggaatgattttcgaaataagtttacaaaacatcaaaagttcaaaggc
cctggtcaaggattccagagatctcagttgcataaagcagataatggaaagaggaagtct
ggattcaaggatcacaagggcaaagggaactataataagatgacaactgggttcaatggg
tctgatgctggtaacatacctaatgagaagaaaagatcatttgctttggtctatacacca
aaagaaattaagcaatggcgtgaatctcggcgtaagaattatccaacgaaactcaacgtt
gcgaagaaagtaaagaaaaatgtttcagaaagcatccttgacgaggaagcaaaaatgcgt
cgtcagcaactccaggaagttttagcaaagcaggctgaattaggtattgaagttgcagaa
gttccttcacattatttatccaatacagatgaacaagttaatggagatagaggaaacaac
aatggaaaaaatcaatacaatgatcggaaaaagggaagattccagaataatagatacaaa
aagagaagacttgatagaaaagataagtctggtaagaaaacaagatttgaagacaaaact
tcatctcaagagtcttccgtgataacgagagaacctacattgcttgagaagctcctaagc
ggagacataaagagagacaaaagccaattattacaggtattccgcttcatggtaatgaat
tcattattcaaggagtttccagagcaaccactgaagttgccgttgattacggtagaagaa
actggatgtgaacatgctagggaagatgaagtttctttatgcgatgaccttagtgatgat
gatgatgatgatgatgatgttgatgtgaatggtgatgataactcatgtgatgaagatgtt
gattga
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