Camelina sativa (false flax): 104706197
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Entry
104706197 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104706197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104706197
03110 Chaperones and folding catalysts [BR:
csat03110
]
104706197
03029 Mitochondrial biogenesis [BR:
csat03029
]
104706197
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104706197
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104706197
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104706197
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104706197
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104706197
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104706197
Exosomal proteins of other body fluids (saliva and urine)
104706197
Exosomal proteins of breast cancer cells
104706197
Exosomal proteins of colorectal cancer cells
104706197
Exosomal proteins of bladder cancer cells
104706197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AUDH_Cupin
Motif
Other DBs
NCBI-GeneID:
104706197
NCBI-ProteinID:
XP_010420657
UniProt:
A0ABM0T486
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All DBs
Position
8:4859009..4861866
Genome browser
AA seq
576 aa
AA seq
DB search
MFAAVSPSSFSPTIISPSRSGQRNNPRKFSVVRAGSKRILYGKDSREALQAGIDKLADAV
SVTLGPRGRNVVLAEKDTIKVINDGVTIAKSIELPDTIENAGATLIQEVAIKMNESAGDG
TTTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVRVLMMRSIPVKGKSDVKAVA
SISAGNDEFVGNLIAETVEKIGPDGVISIESSSTSETSVIVEEGMKFDKGYMSPHFITNQ
EKSTVEFDKAKILVTDQKITSAKELVPLLEKTSQLSVPLLIIAEDISAEVLEILVVNKKQ
GLINVAVVKCPGMLDGKKALLQDIALMTGADYLSGDLGMSLMGATSDQLGVSRRVIITAN
STTIVADDSTKPEIQARIAQMKKDLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETE
LEDRKLRIEDAKNATFAAMREGIVPGGGATYIHLSDEIPRIKKNLLEDLYEQIGADIVAT
ALTAPAMAIATNAGVGGLVVVEKTRELEWRSGYNAMSGRYEDLLNSGIADPCRVSRFALQ
NAVSVAGIVLTTQAVLVEKIKQPKPAVPQVPGIPTT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgccgtatcaccgtcttctttctcgccgacaatcatttctccgagccgtagt
ggtcagaggaacaacccgagaaaattctcagtggtgagagcaggatccaagaggatactt
tacggtaaagatagcagagaagcactacaagccggtattgataagttagctgatgctgtt
tccgttactttaggccctagagggcgtaatgtagtgctagctgaaaaagacacaatcaaa
gttattaacgatggtgtcaccattgctaaatctattgagcttcctgatacgattgagaac
gctggagcaacgttaattcaagaggttgcgattaagatgaatgagtcagcgggtgatggg
acaacaactgcaatcattttggctagagaaatgatcaaagctggatctttggctattgct
tttggagctaatgctgtttctgtgaagaatgggatgaacaagactgttaaagagttggtc
agggtgttgatgatgagaagtattcctgtcaaagggaagagtgatgttaaagctgtggct
tcaatctctgctggcaacgatgaatttgtggggaacttgattgctgaaactgtggaaaag
attggccctgatggcgtcatctccattgaatcatcttccacatcagaaacgtctgttata
gttgaggaagggatgaagtttgacaagggctacatgtctcctcatttcatcacaaaccag
gagaaatctactgtggaattcgacaaagctaaaatccttgtgacagatcagaaaatcact
tcagccaaggaattagttccgttactggagaaaacttcacaactgagtgttccactcctt
ataattgcagaagatatctccgcggaagtgcttgagatactggtggtgaacaagaagcaa
ggtttgattaatgttgctgttgtgaaatgtccaggaatgttggatgggaaaaaggctttg
ctacaagacattgcactcatgacaggagctgattatctttccggagatttaggcatgtct
ctcatgggagcaacttcagaccagctgggtgtttctcggagagtaataattacagctaat
tcgacaactatagtcgcagacgattcaactaaaccggagattcaggcaagaattgctcag
atgaagaaggatctagctgagacagataattcatatctttcaaaaaagatcgcagagaga
attgctaagctcacaggaggcgtggctgtaataaaggtgggaggtcacactgaaacagaa
cttgaggacagaaaacttagaatagaggacgcgaagaacgctacatttgcagccatgaga
gaaggtatagttccaggtggtggtgccacttatattcatctttcagatgagatcccgaga
atcaagaagaatttactggaagatttatatgagcagataggtgcagacattgtagcgacg
gcgctcacagcacctgcaatggccatagcaaccaatgccggggttggtggattagttgta
gtggagaaaaccagagagctcgaatggagaagtggttacaacgcaatgtctggaaggtat
gaggatcttctgaactctggaatagcagatccttgtcgggtttcaagattcgccctccaa
aatgcggtttctgttgccgggatagttctcacgactcaagctgtgctcgtggagaaaatc
aaacagcctaaacctgccgttcctcaagttcctggcatacctaccacataa
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