Camelina sativa (false flax): 104706490
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Entry
104706490 CDS
T05044
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03030
DNA replication
csat03410
Base excision repair
csat03420
Nucleotide excision repair
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104706490
03410 Base excision repair
104706490
03420 Nucleotide excision repair
104706490
03430 Mismatch repair
104706490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104706490
03400 DNA repair and recombination proteins [BR:
csat03400
]
104706490
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104706490
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104706490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
AAA_19
AAA_30
RCF1-5-like_lid
Rad17
AAA_18
AAA_5
nSTAND3
AAA_assoc_2
BRCT_2
RuvB_N
AAA_28
AAA_24
Gp44_lid
AAA_14
NTPase_1
AAA_17
Sigma54_activ_2
Zeta_toxin
TsaE
RsgA_GTPase
Myosin_head
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
104706490
NCBI-ProteinID:
XP_010420990
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All DBs
Position
8:complement(6501619..6508831)
Genome browser
AA seq
956 aa
AA seq
DB search
MSDIRKWFMKAHEKGNGSAPKSTSSKTGAVKSAAETAPIKSEQPSGDLETAARRKTSKYF
GKDKTIVKDEKEEEELPAKRKLKTDSDDLSKPRPRKVTKVDDDDDDFDVPIPRKTRDSTP
SKKLKSGSGRGIATKTVDKDEDDDGEDAQEKETPLKSGGRGRGGRAASGAPTAGRGRGGG
RGGFMNFGERKDPPHKGEKEVPEGTPDCLAGSTFVISGTLDSLEREEAEDLIKRHGGRIT
GSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPIKKSLPERTNKGTE
KVCAPPKTSPQKEVTRGKPLAKSSPNKVPPAKGKKKVIETSLPWTEKYRPKVPNEIVGNQ
SLVTQIHNWLSHWHDQFGGTGSKGKGKKVNDAGANKAILLSGTPGIGKTTSAKLVSQMLG
FQTVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAMAANLDRSKHPKTVLIMDEVD
GMSAGDRGGVADLIASIKISKIPIICICNDKYSQKLKSLVNYCLPLNFRKPTKQQMGKRL
MHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSAIKYDDIRQRLLSSAKDE
DISPFSAVDKLFSYNGGKLRMDERIDLSMSDPDLVPLIIQENYLNYRPSGKDEAKRMELL
ARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASSLHGSREVFEQGERNFNRFGG
WLGKNSTAGKNRRLMEDLHVHVLASRESSSGRETLRVDYLPLLMNRLTSPLQTLPKDEAV
SEVVDFMNSYSISQEDFDTIMELGKFKGRANPMESVPPPVKAALTRKYNELNKTRMVRVA
DMVQLPGMKKAPKKRIAAMLEPTVDSLGDEDGEPLAENEEENASDAEEDSEEANDGEKLE
SNLKNLNARGIQVELDLKGAGSSGSRKAAGKGKGKAADASAEKKATGRGSGTKRKR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattaggaagtggtttatgaaagcccatgaaaaagggaacggaagtgctccg
aaatcgacctcttccaagacaggtgctgtaaaaagtgctgcagagactgcacccataaaa
tcagagcagcctagtggagacctggaaactgctgctagaagaaaaacgagcaagtatttt
gggaaagataaaacaatagttaaagatgagaaagaggaggaagaattacctgccaagagg
aaacttaagactgattctgatgatttaagcaagccccgtccaagaaaggttaccaaggtt
gatgatgacgatgacgattttgatgtacctattccaaggaagactcgtgatagcactccc
agcaaaaaactaaagtcggggtcaggtagaggaatcgcaactaaaactgttgataaagac
gaggatgatgatggtgaagatgcccaagaaaaggagactcctctgaaatcaggtggaaga
ggccgtggcggtagagctgcatcaggggccccaactgctggaagaggtagaggtggaggg
cgaggtgggtttatgaattttggtgaaaggaaagacccaccgcataaaggagaaaaggag
gttcctgaaggcacccctgattgcttagctggatcgacatttgtaattagtggaacactt
gatagtttagaaagagaagaagcagaagatcttataaagcggcatggtggtcgtattaca
ggctctgttagcaagaaaacgacgtaccttttgtgtgatgaagatatcggcggaaggaaa
tctgaaaaagctaaagagctgggcactaagttccttacagaggatggcctatttgacatg
atccggtcctcgaaacccataaaaaagtctctgcctgaaaggacgaacaaaggcactgaa
aaagtctgtgcaccaccgaagacaagccctcagaaagaagtgacaagaggaaagccttta
gcaaaaagttcgcccaacaaggttcccccagcgaaaggaaaaaagaaagttattgagact
tccttgccatggacggaaaaatacagaccgaaggttccaaatgagattgttgggaatcag
tcactggtaactcagattcacaactggctgtcccactggcatgatcaatttggaggtact
ggaagtaaaggaaaggggaagaaagtgaatgatgccggtgccaacaaggctatacttttg
agcggaacacctggtattggaaaaacaacatcagcaaagttggttagtcagatgcttggt
ttccagacagttgaggttaatgctagtgacagtcgtggaaaggcgaactcgaatatcgcc
aaaggtattggtggtagtaatgcaaatacggtgaaggaacttgtcaataacgaagccatg
gccgctaacttggataggtcaaagcacccgaagactgttctaatcatggatgaagtagat
ggaatgtctgcaggcgacaggggaggtgttgccgatcttattgctagcattaaaatatca
aagattcctatcatctgcatttgcaatgacaaatacagtcagaaactgaagagtttagta
aactattgtcttcccctcaatttccggaagcccacgaaacagcagatgggaaaaaggctg
atgcatattgctaaggcagaaggccttgaagttaatgaaattgccctggaagaactcgct
gagagagtgaatggtgacatacgattggccctaaatcagctccaatatatgagcctgtcc
atgtcagccatcaagtacgatgatatcaggcagcgcctgctaagcagtgctaaggatgaa
gatatttcccctttctcagctgttgacaagttgtttagttataatggtgggaagctgaga
atggatgaacggattgacctgagcatgagtgatcctgatttggttcctctaattatacag
gaaaactatctcaattataggccatcaggtaaagatgaggcaaaacgaatggagttactt
gctcgtgctgctgaatccattgcggatggagatattatcaacgtgcagattcgaagatac
aggcaatggcaactttctcagtcatgctgtgttgcatcttctattctcccagcttcgtcg
ttgcatggatcaagggaggtattcgagcagggtgagcgtaacttcaatagatttggtggg
tggcttggcaagaattctactgcgggaaaaaatagacggttaatggaggatctgcatgtt
catgtccttgcttcccgagaatccagctctggaagggagactcttcgtgttgattatctt
cccctgctcatgaatcgcttgactagcccacttcagacgctgcctaaggatgaagctgtt
tcagaagttgttgatttcatgaactcctactctataagtcaggaggactttgatactatt
atggagttgggaaaatttaaggggcgtgcaaatccgatggagagtgttccacctccagtt
aaagcagctttgactagaaaatataatgagttgaataaaaccagaatggtacgtgttgct
gacatggtgcaacttccgggaatgaaaaaggcccctaagaagcgaatagctgctatgctg
gagccaactgttgatagtttgggagatgaggatggcgagccgttagcagaaaatgaagaa
gaaaatgcatcagacgctgaagaagactcagaagaagcaaatgatggagaaaagctagag
tcgaatctaaaaaatctgaatgctagagggatccaagttgaattggatttgaagggagct
gggagctctggttcaagaaaagcagctggtaaaggcaaaggcaaagcagcagatgcgtct
gctgagaagaaagctacagggagaggctctggtaccaagagaaagagatga
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