Camelina sativa (false flax): 104706645
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Entry
104706645 CDS
T05044
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csat04812
]
104706645
Cytoskeleton proteins [BR:
csat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104706645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
104706645
NCBI-ProteinID:
XP_010421144
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Position
8:complement(7723678..7730977)
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AA seq
841 aa
AA seq
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MTTKRAYKLQEFVAHSAAVNCLKIGRKSTRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS
GIDSVTFDASEGLVAAGAASGTIKFWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE
FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK
TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR
TEPCMAGDTAQSNGHPEKRSCSGRDPVILNDNNSKTILGKLSVSQNVDPLLKETKSLERL
SVSQNSDSSTKETKSIGRSSISQNSDSSMKESKPLGRLSVSQNSDFSKEPRTLSSTGSLP
STPHRVNSTNVSKATSGGSTAVSNAATSRRNFTKANPKANPVNKAADFAPVIVPRADPRI
EQATESRAELDIIARTMPYSLQAADSRRSPSSRNNPDLPNTSVLEMSESQLVEPNNILDG
GTLPGGKVGMRGAPERSINDFRYKRYGRSNSRSRMGSPPRNHDENFFVSDDLVSHKSNRD
PSPTESQKGGRFQPLVINRERRGRFSNFEGPVSNFSSGNVPVPNIRPSNMFKQRGNHMPV
EQGVDSPSEDNIVEDIMGKHDQFVSSMQSRLAKLQVVRRYWERNDVKNSIGSIEKMADNA
VTADVLGIITERNETLTLDNCTSLLPLLTALLGSDMDQHLSVSLDLLLKLVRLYGSPIYS
SLSAPASVGVDIEAEQRIERYSRCFVELEKVKACLPSLARRGGLVAKSVLELNLAFQEVS
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaagcgagcctacaagcttcaggaatttgtggcacattccgctgctgtcaat
tgtcttaagatcggaaggaaatcgaccagggttctggttacaggtggggaagatcacaag
gtcaatctctgggctattggtaagcccaatgccattctgagcttgtatgggcactcaagt
ggaattgattcagtgacctttgatgcttcggagggcttagttgcagcaggagctgctagt
ggtactatcaaattttgggatttagaagaggcaaagattgtcaggactctcactggtcat
cggtcgaattgcatctcagtggattttcatccttttggtgagttttttgcgtctggatcg
ctagacacaaatcttaagatatgggatataagaaaaaagggttgcatccatacttacaag
ggtcacactcgaggagtcaatgtactcagattcaccccagatggtcgctgggttgtatct
ggtggagaggacaacattgtgaaggtgtgggatttaacagctggaaagttgttgaccgag
tttaagagtcacgaagggcaaattcaaagtctagattttcatcctcatgaatttctactg
gcaacaggttcagctgataggactgtaaaattctgggatctggaaacatttgagctgatt
ggttctggtggacctgagactgccggggtccgttgcctgagctttaatccagatggaaaa
actgtgctttgtggattgcaagaaagtctcaagattttctcgtgggagccaattagatgt
catgatggagtggatgttggatggtcaagactgtcagatatgaatgttcacgagggaaag
cttcttggttgctcgtacaatcaaagttgtgtaggcgtgtgggttgtagatctctcgcgt
actgagccatgtatggctggagacactgcacaatcaaatggtcatccagagaaaagatct
tgctcaggaagagatccagtaattctcaatgataataactcaaagactattctcgggaag
ctgtccgtttcccagaacgtagatcctttattgaaggaaacaaagtctctcgaaagacta
tctgtttctcagaactctgattcttcgacaaaagaaaccaagtccattggaagatcatca
atatcccaaaattcagattcttcgatgaaggaatcaaagcctctcggtaggttgtctgtt
tctcaaaattcagatttttcgaaagagccaaggacgttgtcatccacaggaagtttacca
agcactcctcatagggtcaattcgaccaatgtgtcaaaagccacttcgggtggttcaacg
gctgtctctaatgctgcaacatcaaggaggaattttacgaaagctaacccaaaggcgaat
cctgtaaataaggcagcggattttgctccggtgattgtcccaagagcagaccctagaata
gagcaggctactgaatccagagcagaacttgacataattgcaagaaccatgccttattca
ttgcaggcagctgattctcgaaggtcacctagcagcagaaataaccctgatctgccaaat
acttcggttcttgaaatgtctgagtctcagcttgttgaaccaaataatatactagatgga
ggtacacttcctggtggaaaggttggcatgcggggtgcacccgagcgaagcattaatgat
tttagatacaagagatatggaaggagtaattcaaggtcacgcatgggatcacctccacgg
aaccacgatgaaaacttctttgtttcagatgacttggtaagccacaaatcaaatagagac
ccaagtcccactgaaagtcagaaaggaggaagattccagccactcgtcataaacagggag
agaagggggagattttcaaactttgagggtcctgtttcgaatttttcaagtggaaatgtg
cctgttccgaacatccgcccttcaaatatgttcaagcaaagagggaaccatatgccagtt
gaacaaggggtcgattctccttctgaagataatatcgttgaagacataatggggaaacac
gatcaatttgtcagctctatgcagtctcgtttggctaaattacaggtagttcgtagatat
tgggaaaggaatgatgtaaaaaactcgataggttcgatagaaaagatggctgataatgct
gttacagcggatgtactgggtataataacagagagaaatgagactttgacgctggataat
tgtacctcccttcttccccttttaacagctcttctagggagcgacatggatcagcatttg
agcgtttccctggatttgctgcttaagctggtcagattgtatgggtcaccaatttactca
tcactgtcagctccagcatctgttggtgtagatatcgaggctgaacaaaggatcgagcga
tacagtcgttgctttgtagaactagagaaagtcaaagcttgccttccctctctagcaaga
agaggaggtttggtggctaagtctgtgcttgaactcaacctagcatttcaggaagtatca
tcataa
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