Camelina sativa (false flax): 104706712
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Entry
104706712 CDS
T05044
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104706712
Transcription machinery [BR:
csat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104706712
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Response_reg_2
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
104706712
NCBI-ProteinID:
XP_010421222
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Position
8:complement(8388387..8391087)
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AA seq
519 aa
AA seq
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MGVVFISSSAARSPLGLSTDLLTTHRSSLKKPSIVAFKADDSSSSALIIPPREQVLIPAE
KLNEKKRVVTKRKPCKTPKKPSSLDDHNAAPSCSLGVDYYNEAAARLENIYKLSPATVED
DVVDGGSKAKVPRRRKRKQSGEAEKKVVVRNNVKKDKRLSLDKRIALKRNCEEKPFVVSS
AEKKVTKRQQEEEKIERLVRDYSASNDILSLDWKKMKIPPVLSSTEHAWLFKLMQPMKAL
LEVKDELQKSLGREPREAEIAKEIKMTTGEVKKKIEIGRAARNKLIKHNLRLVLFVMNKY
FQDFTNGPKFQDLCQAGMKGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRV
PFGLESVRVEIYKAKMELLFELGRLPTEKEVVEKLKITPERYREVLRAAKPVFSLNSKHA
VTQEEFINGITDVDGVGADNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
GEIAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYIV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtttatttcaagttcagcagcaagatcaccactcggtttaagcaccgat
cttttgacaacacatcgttcttcccttaaaaaaccatccattgtcgcattcaaagccgat
gattcaagcagttcagctttgatcattcctcctcgagaacaagttttgatccccgctgaa
aagcttaatgagaaaaagagagtagtcacgaagaggaagccgtgtaaaaccccgaaaaaa
ccaagttctttggatgatcacaatgcagctccttcgtgttctttaggagttgactattac
aacgaagctgctgctaggcttgagaacatatacaagcttagtcctgcaacagttgaggat
gatgttgttgatggcggatccaaagctaaagttccgcggaggagaaaacggaaacagagt
ggtgaggcagagaagaaagtggtagtgaggaacaatgtgaagaaagataagcgtttgagt
cttgataaacggatagctttgaagagaaactgtgaagagaaaccatttgttgtttcttct
gctgagaagaaagtaacaaagaggcagcaagaagaggagaagatcgagaggcttgtgcgg
gactattcagcttctaatgatatattgagcttggactggaaaaaaatgaagatacctcct
gttctttcttctactgaacatgcttggttgtttaagttgatgcagcctatgaaggctcta
cttgaagtgaaagatgaactgcaaaagagcttgggaagagagccgagggaagctgaaata
gctaaagagatcaaaatgaccactggtgaagttaaaaagaaaattgaaattggtagagct
gcaagaaacaaacttattaagcacaatctccgacttgtcttgtttgttatgaacaaatat
tttcaagatttcaccaatggaccgaagtttcaagacctttgtcaagctggcatgaaaggg
ctaatcacagcaattgaccgctttgagccgaaaaggaagtttcgtctatcgacttatggt
ttgttttggataagacatgccatcatacggtctatgacaacctcaaactttactcgtgtt
ccatttggacttgaatcggttagagttgagatctataaagcgaagatggagctattgttt
gagctggggagactccctacagagaaagaggtagttgagaaactcaagataacacctgag
agataccgtgaagtattgagagccgcaaaacctgttttctcactaaattcaaaacatgcg
gttactcaagaagaattcatcaatggaatcacagatgttgatggtgttggagctgataac
aggagacaacctgctcttctcaggcttgctctcgatgacgtgcttgattcattgaagccg
aaagagagtctggttattcgacagagatacggtcttgatgggaaaggagacaggactcta
ggagagatagctggaaatctcaacatctctagagaaatggtgaggaaacatgaagtcaag
gctttgatgaagctcaagcatcaggcccgagttgattaccttcgtcaatacattgtctga
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