Camelina sativa (false flax): 104706997
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Entry
104706997 CDS
T05044
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104706997
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104706997
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104706997
Protein phosphatases and associated proteins [BR:
csat01009
]
HAD phosphatases
Fcp/Scp phosphatases
104706997
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104706997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
PAD_M
Motif
Other DBs
NCBI-GeneID:
104706997
NCBI-ProteinID:
XP_010421540
LinkDB
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Position
8:11873752..11878008
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AA seq
890 aa
AA seq
DB search
MEANHPKDEAYLSAVIPKRTKQIQANQLESLPHNPIKMTSPDGNVKEGNKRETTPIDDQV
IAINDAVHKLQLAMLDGITDQNQLFAAGKLISRLDYEDVVTERTIAKLCGYPLCQRFLPS
DVSRRGKYRISLKEHKVYDLQETGKFCSAGCLIDSKTFSGTLQDARTSEFDTVKLNEILA
LFGDPEVKGSLDVNKALDLSKLVIRENFEASGGELSLEQWMGPSNAVEGYVPLDQSDCKS
RNCKDISDSKATQKNQEKHENPPFSEMDFTSTVIMPDEYSVSKLLPQTKQASPVGESDDG
KGKTVMRVQTVVPPTQKKSRFRREKKKEKKTFGVDGIDFASFGFDGMGCVSSGTGSDGHS
VEYSVSKQPPCSTEDPMGGQLKKDHKTLDGKSSLTGSSSASKNKSLKLPTQAKQATHGGE
SEDGKMKTVMTNFGQTAVPPRKELGFCNDPEIEKDIKNFWFDEMGLASSAIMSDGYGVEY
SVSKQPQCSMEDSLSCNLKGGLQTVDGKSTLSGSSSGSNTKGSRTKPEKSGKKKISIEYH
ANSYEDGEEYLAADLSEIHKVQDVCSSSETVTKSCLKTSGCKKLSRSVTWADQNDGCGDL
CEVRNNDIAAGPSLSSTDTKDVNSLSRLALAEACATALSQAAEAVSSGDTDASDATAKAG
IVLLPSTHQLDEEVTEEHIEDEEESTLLKWPNKPGIPDSDLFDRDQSWFDGPPEGFNLTL
SSFAVMWDSLFGWVSSSSLAYIYGKEESAHEEFLSVNGKEYPRRMILGDGLSSEIKQTIA
GYLARALPRVATYLRLPIAISELEKGLGSLLETMSLTGAVPSFKIKEWLVIVLLFLDALS
VSRIPRIAPYISNRDKILEGSGIGNEEYETMKDILLPLGRVPQFATRSGA
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaatcatccaaaggatgaagcgtatctttccgcagtcatccccaaacgtacc
aagcagattcaagccaatcaactcgagtctctaccacacaatccaatcaagatgacatcg
ccagatgggaatgtgaaagaaggaaacaaacgagagacaactccaatagatgatcaagta
atcgccattaacgatgcggttcacaagcttcagctcgctatgctcgacggtatcactgat
cagaaccagctcttcgcggcggggaagttaatttctcgattagactacgaagatgtcgtc
actgaacgaaccatcgctaagctctgtggttatcctctttgccagagatttctcccttcc
gatgtttctagaagaggaaagtatcggatttcgttgaaggagcataaggtttacgattta
caggagacgggaaagttttgctccgcgggttgtttaattgatagcaaaacgttttcgggg
actttgcaagatgctcgtacctcggagtttgatacggtgaagttgaatgagattttggcg
ttgtttggtgatccggaagtgaaaggttctttggatgtgaataaggccttagatttgtct
aagcttgtaattcgggagaattttgaagcgagtggtggagaattgtctttagagcagtgg
atgggtccttctaatgctgttgaaggttatgttcctttggatcaaagtgattgcaaatca
agaaattgcaaagacataagtgattccaaggctactcaaaagaatcaagagaagcatgag
aacccgccttttagcgagatggatttcactagcacagtaattatgcctgatgaatatagt
gtttcaaagcttctaccgcaaaccaaacaagcttctcctgttggggaatctgatgatggc
aaagggaaaacagttatgagagtgcaaactgtagttcctcccacacaaaagaaatcaagg
tttcgtcgtgaaaaaaaaaaggaaaagaagacgtttggggttgatgggatcgattttgcg
agctttgggtttgatgggatgggttgtgtgagctctggtactggaagtgatggacacagc
gttgaatatagtgtgtctaagcaaccaccatgctcaacagaagaccctatgggtggtcaa
ttaaaaaaggatcataagactttggatggaaaaagttctctaacaggatcctcttctgca
tctaagaataaaagtttgaagcttccaacacaagccaaacaagctactcatggaggggaa
tcagaggatggcaaaatgaaaacagttatgacaaattttggacaaactgcagttcccccc
aggaaagaattgggtttttgtaatgatcctgaaatagagaaggacattaagaatttctgg
tttgatgagatgggtcttgcgagttcggcaattatgagtgatgggtacggcgtagaatat
agtgtgtctaagcagccacaatgttcgatggaagattctcttagttgcaatctaaaagga
ggtcttcagactgtggacggaaaaagtactctatcaggatcctcttctggttctaatacg
aagggctcgaggacaaaaccagaaaaatcaggaaagaaaaagatttctattgaataccat
gctaattcttatgaagatggtgaagaataccttgcagctgatttgtccgaaatacacaaa
gttcaggatgtgtgttcatcaagtgaaaccgttacaaagtcatgccttaaaacttctggt
tgtaagaagcttagccgttcagttacttgggccgaccagaatgatggctgtggtgatctt
tgtgaggttagaaacaatgatatcgccgcaggtcctagcctgtcttctactgatacaaag
gatgtcaatagtttatcacgccttgcattagcagaagcctgtgctacagcattaagccag
gctgccgaagctgtatcttcaggagatacagatgcaagtgatgccactgcaaaagctgga
atagttttgttaccaagtacacatcaacttgatgaagaggttactgaggaacatatcgaa
gacgaagaggaatcaactcttctgaagtggccaaataaacccggtattccagattctgat
ttgtttgaccgtgatcaatcgtggtttgatggacctcccgagggcttcaatctcacatta
tcaagttttgctgtgatgtgggattcactgtttggctgggtatcatcgtcctctctggca
tacatatatgggaaggaagagtctgctcatgaggagttcttatcagttaacgggaaggag
taccctcggaggatgatcttgggagacgggctttcctcagagatcaagcagacaattgct
gggtaccttgccagagctttacccagagtcgccacttatctcaggctgccaatagcgata
tccgaattagaaaagggactgggaagcttgttggaaacaatgtcgttaacaggggcagtt
ccatcatttaagattaaagaatggcttgtgatagttcttctttttttggacgcattgtct
gtatcacgtatccctcggattgcaccttatatatctaacagagacaagattttggaagga
agtggaataggaaacgaagagtatgagacaatgaaggatatcctgttaccactaggccgc
gttcctcaatttgctacccgaagcggagcgtag
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