KEGG   Camelina sativa (false flax): 104707025
Entry
104707025         CDS       T05044                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
csat  Camelina sativa (false flax)
Pathway
csat03030  DNA replication
csat03410  Base excision repair
csat03420  Nucleotide excision repair
csat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104707025
   03410 Base excision repair
    104707025
   03420 Nucleotide excision repair
    104707025
   03430 Mismatch repair
    104707025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csat03032]
    104707025
   03036 Chromosome and associated proteins [BR:csat03036]
    104707025
   03400 DNA repair and recombination proteins [BR:csat03400]
    104707025
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104707025
  DNA Replication Termination Factors
   ELG1-RFC complex
    104707025
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104707025
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104707025
  Check point factors
   HRAD17(Rad24)-RFC complex
    104707025
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 AAA_22 DUF815 AAA_5 RuvB_N RsgA_GTPase ABC_tran AAA_29 AAA_23 Mg_chelatase AAA_16 AAA_24 AAA_2 T2SSE nSTAND3 ATPase_2 AAA_11 FtsK_SpoIIIE nSTAND1 TsaE
Other DBs
NCBI-GeneID: 104707025
NCBI-ProteinID: XP_010421579
LinkDB
Position
8:complement(12238439..12242831)
AA seq 354 aa
MLWVDKYRPKSLDKVIVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLKQIYG
ASAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR
CLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNY
PFTSNQVISPMDWEEYVTEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHE
LLRKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtcgacaagtacagaccgaaatcactggacaaggtcattgttcatgaagat
atcgcccaaaatctcaagaaactggttaccgagcaagattgtccgcatttgctcttttat
gggccgtcaggttcgggtaagaaaaccctaatcatggcgcttctcaagcagatatatggt
gctagtgcagagaaggtgaaagtggagaacagggcgtggaaagttgatgctgggagtaga
actattgatctcgagctgactacattatcaagcaccaatcatgtggagcttactccaagt
gatgcaggctttcaggaccgatacatcgttcaggagataattaaagaaatggccaagaac
agaccaattgacacaaaaggaaagaagggatataaggtgttggtattaaatgaggttgac
aagctctcacgagaagctcaacattctctgcggagaacaatggagaaatatagctcatct
tgccgtctcatcttatgctgtaacagctcttcaaaggttacggaagccattaagtctcgt
tgtcttaatgtgcgcataaatgcaccttcgcaagaagagatagtgaaagtgttggagttc
gttgcaaagaaagaaagtttgcaactgccccagggttttgctgctcgtattgctgaaaaa
tcaaatcgcagtcttcgaagagctattttgtcacttgagacttgtcgtgtccaaaactat
ccgttcacaagtaatcaagtgatatctcccatggattgggaagagtatgttactgaaata
gcaactgacatgatgaaggaacaaagccctaaaaagttatttcaggtgcgtggaaaggtg
tatgaattgctagttaattgcattccaccagaagtcattctaaagagacttcttcatgaa
ttgctgaggaaactggactcagagctaaagcttgaagtctgccactgggctgcatattat
gaacaccggatgcgattgggtcagaaagccatatttcacattgaagcatttgtggcaaag
tttatgagcatatacaaaaacttcctcatttcaacctttgggtag

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