Camelina sativa (false flax): 104707038
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Entry
104707038 CDS
T05044
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104707038
03012 Translation factors [BR:
csat03012
]
104707038
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104707038
Translation factors [BR:
csat03012
]
Eukaryotic type
Initiation factors
eIF-3
104707038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
IKI3
Motif
Other DBs
NCBI-GeneID:
104707038
NCBI-ProteinID:
XP_010421590
LinkDB
All DBs
Position
8:12297394..12301705
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AA seq
713 aa
AA seq
DB search
MEVLDIDARAAKLGIDWSQVNLDSIQLPPGQDFGIESDDEAVYHDDQSEFDTGFGNIIVV
DHLPVVPMEKFEKLEGVVKKIYNQIGVIKENGLWMPVDPDTKMTLGYCFIEFNSPQEAQN
AKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQARPYVPGENLQKWLTDEKARDQ
LVIRSGPDTEVFWNDARQKNPEPVHKRPYWTESYVQWSPLGTYLVTLHKQGAAVWGGADT
FTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGS
ADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNV
VDICWSPTDSILSLFVPEQGGGNQPAKVALVSIPSKVELRQKNLFSVSDCKMYWQSSGEY
LAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHG
DQPRPDVSFYSMKTAQNTGRVSKLGTLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFN
VDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFTIWSFNGNLLYRILKDHFF
QLAWRPRPPSFLTAEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQDREKRKALNEEWEKW
VMQWKSLHEEEKLARQSLRDGEVSDVEEDEYEAKEVEFEDVIDVTEEIVQESM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcttgatattgatgcccgagcggctaagctaggaattgattggtctcaggtt
aatcttgattccatccaacttcctcctggacaagactttgggatcgagagtgatgatgaa
gctgtttatcacgatgaccagtcagaattcgacactggattcggtaacattatcgtggtt
gatcacctccctgttgttcccatggagaagtttgagaaacttgaaggtgtggtcaagaaa
atttacaaccagataggtgtgatcaaggagaatggactctggatgcctgttgatcccgat
accaagatgacattgggctactgttttattgagttcaattcccctcaggaagcacaaaac
gctaaggaaaaatctcatggctacaagttggacaagtctcacatctttgctgtaaacatg
ttcgatgatttcgacaggttgatgaatgtgaaggaggagtgggagcctcctcaggccagg
ccgtatgttcctggggaaaatttgcaaaagtggcttactgatgaaaaagcccgggaccag
ctcgtcattcgttctggccctgatactgaagttttctggaatgatgctaggcagaagaat
ccagaacctgttcataaacgtccttattggacagagagttatgtgcagtggtctcctcta
ggtacataccttgttacacttcacaagcagggagcagctgtttggggtggtgctgataca
ttcacgcgtctcatgcgttatcagcattctatggtaaaactagttgatttctctccaggt
gagaaatatctggtaacataccatagccaagaaccaagcaacccgcgggatgcaagtaaa
gtagagattaaggtctttgatgtgagaaccgggaggatgatgagagattttaagggtagt
gctgatgagttttcaattggaggacctggtggtgtcgctggtgcctcttggcctgttttc
agatgggctggtggaaaagatgataaatactttgccaagcttagcaaaaacactatctct
gtttatgagaccgagactttcagcctaatagacaagaaatccatgaaggttgataatgtt
gtagatatttgctggtctcctactgattccatcctttcattgtttgttcctgaacaaggt
ggtggaaaccaacctgccaaggttgctctagtctcaatccctagcaaagtggagctaagg
cagaagaatctcttcagtgtgagtgactgcaagatgtactggcagagtagtggagagtat
cttgctgtcaaggttgatcgatacacaaaaactaagaagagcacatactctggatttgag
cttttccgtatcaaagaaagggatattcccattgaggttcttgagctggacaacaagaac
gacaagatcattgccttcgcttgggagcccaagggtcacaggtttgctgtaattcatggt
gaccaaccaagaccagatgtcagtttctattcaatgaagactgcacaaaacactggaagg
gtttcgaagctcgggactttgaaggccaaacaagccaatgccctcttctggtcgcccaca
ggcaagtacataattcttgctgggttaaagggtttcaacggccagcttgaatttttcaac
gtggatgagctcgagacaatggccacagctgaacacttcatggccacggatatcgaatgg
gacccgactggaaggtatgttgcaactgctgtgacatcagtccacgagatggaaaatggg
ttcaccatatggtctttcaacgggaatttgctttaccggattctgaaggatcatttcttc
cagttggcttggcgtccaagaccaccatcattcttgactgcggagaaggaagaagagata
gcaaagaacctgaagaagtacagcaagaagtacgaggcagaggaccaggacgtgtctttg
ctattgagtgaacaagacagagagaagaggaaggcactgaatgaagaatgggagaaatgg
gtaatgcagtggaagtctctgcatgaagaggagaaactcgcgaggcaaagtcttcgggac
ggtgaagttagtgatgtggaagaagatgagtatgaagctaaagaagttgagtttgaggat
gttattgatgtaactgaggaaatcgttcaagagtcgatgtaa
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