Camelina sativa (false flax): 104707227
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Entry
104707227 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104707227
03460 Fanconi anemia pathway
104707227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104707227
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104707227
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
Megourin
Motif
Other DBs
NCBI-GeneID:
104707227
NCBI-ProteinID:
XP_010421834
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Position
8:complement(15264964..15273805)
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AA seq
582 aa
AA seq
DB search
MEHEPKPCAAVKGTQILVENLFYNMIARRKTLQNSADDYGKIVDLLSRMAIHHNNVSFSC
RKHGAVKADVHSVVSPSWLDSVRSVYGVSVAKNLMKVEVSSSDPSGCTFDMEGFISNSNY
VAKKTILVLFINDRLVECSALKRAIEIVYAATLPKASKPFVYMSINLPREHVDINIHPTK
KEVSLLNQEIIIEMIQSEVELKLRSANDTRTFQEQKVEYIQSTLTSSRSDPPVSPLLSGQ
KTQKVPVNKMVRTDSSDPAGRLHAFLQPKSHNLPDKVSSLSVVRSSVRQRRNPKETADLS
SVQELIAGVDSCCHPGLLETVRNCTYVGMADDVFALVQYNTHLYLANVVNLSKELMYQQT
LRRFAHFNAIQLSDPAPLSELILLALKEEDLDLGNENNDDLKERIAEMNTDLLKEKTEML
DEYFSINIDSNGNLSRLPVILDQYTPDMDRVPEFLLCLGNDVEWEDEKTCFQGVSAAIGN
FYAMHPPLLPNPSGDGIQFYTKRSESSQDNTDLGGNVEMEENIDQDLFSDAENAWAQREW
SIQHVLFPSMRLFLKPPAAMASNGTFVKVASLEKLYKIFERC
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgaaccaaagccgtgtgctgctgtcaaaggaactcagatattggtggagaat
ttgttttacaatatgattgctagaaggaagacacttcaaaattctgctgatgattatggg
aaaatagtagacttgctgagtcgtatggccatccatcacaataatgtaagcttttcttgt
cgaaagcatggagctgtcaaggcggatgttcactcagttgtgtcgccttcatggcttgat
tcagttaggtccgtttatggggtatcagttgcaaagaacttgatgaaagtagaagtctcc
tcttctgacccctctggttgtacttttgatatggaaggtttcatatccaattcaaactat
gttgctaagaagaccatactggtgcttttcattaatgatagattggtggaatgctctgcc
ttaaaaagagccattgagattgtttatgctgcaacgttgccaaaagcatcgaaacctttt
gtctacatgtcaattaatttgccacgagaacatgttgatatcaatattcatccaacaaag
aaagaggttagccttcttaaccaggaaatcattatcgagatgattcagtcagaggttgaa
ttaaaactgagaagtgcaaatgatactaggacttttcaagagcagaaagtggaatacatt
caatctacgttaacatcctcgagaagtgatcctccagtttctccgttgctttctggacaa
aaaacacagaaagttcctgtaaataaaatggtgagaacggattcatcagatccagctgga
cggttacatgcttttttgcaacccaaatcccataatctccctgacaaggtttctagtttg
agtgtagtaaggtcttctgtaaggcaaagaagaaacccaaaggaaactgcagatctttct
agtgtccaggaactcattgctggagttgacagctgctgccatccaggtctgctggagact
gttaggaattgcacatatgttggaatggcagatgatgtttttgctttagttcagtataac
acccatctatatctagcaaatgtggtgaacctcagcaaagagctcatgtatcagcaaact
cttcgtcgttttgctcattttaatgctatacagcttagcgatccagcccctttgtcggag
ttaatattgttggctctgaaagaggaggatctagatctaggaaatgagaacaatgacgat
ctgaaagaaagaatcgctgaaatgaatacagatcttctgaaggaaaaaacggaaatgtta
gatgagtatttcagcattaacattgactccaatggaaatttgtcaaggcttcctgtcata
ctcgaccagtatacacctgacatggaccgagttcccgaatttttactgtgcttgggaaat
gatgttgagtgggaagatgagaagacttgctttcaaggagtttctgcagctattgggaac
ttttacgcgatgcatcctcctcttttgccaaacccatcgggtgacggtattcagttctat
actaagagaagtgagagctctcaagataatacagatttagggggtaacgttgagatggaa
gaaaatattgatcaagaccttttttcagatgctgaaaacgcatgggcacaacgtgaatgg
tctatccaacacgtgttgtttccgtctatgagattgttcttgaagccaccagccgccatg
gcttcaaatggaacttttgtcaaggtagcatcccttgaaaagctgtacaagatattcgaa
cgatgctag
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