Camelina sativa (false flax): 104707388
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Entry
104707388 CDS
T05044
Name
(RefSeq) long chain acyl-CoA synthetase 5-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00061
Fatty acid biosynthesis
csat00071
Fatty acid degradation
csat01100
Metabolic pathways
csat01212
Fatty acid metabolism
csat04146
Peroxisome
Module
csat_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
104707388
00071 Fatty acid degradation
104707388
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104707388
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csat01004
]
104707388
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104707388
Enzymes [BR:
csat01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
104707388
Lipid biosynthesis proteins [BR:
csat01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
104707388
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of breast milk
104707388
Exosomal proteins of breast cancer cells
104707388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
104707388
NCBI-ProteinID:
XP_010422032
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Position
8:17669316..17673348
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AA seq
666 aa
AA seq
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MTSQKRFIFEVEAAKEATDGNPSVGPVYRSTFAKNGFPNPIDGIQSCWDIFRTAVEKYPN
NRMLGRREIVNGKAGKYVWKTYKEVYDIVLKLGNSLRSCGIQEGEKCGIYGINCTEWIIS
MEACNAHGLYCVPLYDTLGAGAVEFIISHAEVSIAFVEEKKIPEIFKTCPNSTKYLKTVV
SFGGVKPEEKEEAEKLGLVIHSWDEFLKLGEGKEYDLPVKKQSDICTIMYTSGTTGDPKG
VLISNESIVTITTGVMHFLENVKATISEKDVYISYLPLAHVFDRAIEECVIQVGGSIGFW
RGDVKLLIEDLGELKPSIFCAVPRVLDRVYTGLQQKLSGGGFFKKKVFDVAFSYKFGNMK
KGQSHVAAAPFCDKLVFNKVKQGLGGNVRIILSGAAPLASHIESFLRVVACCHVLQGYGL
TESCAGTFATFPDELDMLGTVGPPVPNVDIRLESVPEMNYDALGSTPRGEICIRGNTLFS
GYYKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLAQGEYVAVENLENIYS
QVEAIDSVWVYGNSFESFLVAVANPAQQTLERWAVENGVNGDFNSICQNAKAKAFILGEL
VKTAKEKKLKGFEIIKAVHLEPVAFDMERDLLTPTYKKKRPQLLKYYQSVIDEMYKTTKE
GQASGQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcagaagagattcatttttgaggtggaggcggctaaggaagccaccgatgga
aacccctctgttggccctgtttatcgtagtacttttgccaagaatggtttcccaaatccc
atcgacggaatccaaagctgttgggatattttccgcacggctgttgagaaatatccaaac
aatcgaatgcttggtcgccgtgagattgtgaacgggaaggcagggaagtacgtgtggaaa
acatacaaagaagtatatgatatcgtcttaaaacttgggaattctctacgtagttgtggg
attcaggagggagaaaaatgtggtatctatggtataaattgtactgagtggatcattagc
atggaggcttgtaatgcacatggcctctattgtgtccctttatacgatacattaggcgct
ggtgctgtggaattcattatttcacatgcagaggtttcgattgcgtttgtggaggagaag
aagatccctgagatttttaagacttgtccaaactcaacaaaatatctgaagactgttgtg
agctttggcggtgtcaaaccggaagagaaagaagaagctgaaaaattggggttggtaata
cattcttgggatgagtttttgaagctgggtgaaggtaaagaatatgatctccccgttaaa
aagcaaagcgacatatgcacgattatgtatacgagtggaaccactggtgatccgaaggga
gttctgatttcgaacgaaagcattgttactataactactggagtgatgcatttccttgag
aatgttaaggcaaccatatctgagaaggatgtgtatatttcttatcttcctcttgcgcac
gtctttgaccgggctatcgaagaatgtgttattcaagtaggtggttctattggtttctgg
cgaggggatgtcaaattgttgattgaagaccttggtgagctaaaaccaagtattttttgt
gccgttcctcgtgtcctagatcgtgtatacacaggactccagcagaaactatctggtggt
ggttttttcaaaaagaaggtgtttgatgttgctttctcctataaatttggaaatatgaag
aagggacagtctcatgtggctgcagctccattttgtgacaaacttgtattcaacaaggtt
aaacaaggacttggaggcaatgtgaggattattctatctggagcagctcctcttgctagt
cacatagaatcatttcttagagttgtggcatgttgtcatgttctacaaggatatggtcta
accgagagctgtgctggaacttttgcaacgttcccagacgaactagacatgcttggaaca
gttggtccaccggtgccaaacgtggatatacgcctagaatctgtcccggaaatgaattac
gatgctcttggaagtactccccgtggcgaaatctgcatccgtggaaacactttgttttcc
gggtactacaaacgtgaagacctcacaaaagaagttcttattgatggctggttgcacaca
ggtgatgttggtgagtggcaaccaaatggaagcatgaagataattgaccggaaaaagaac
atattcaaactcgcgcaaggagagtatgtcgcagttgagaatttagaaaatatctacagt
caagtagaagctattgattcagtatgggtgtatggaaacagctttgagtccttccttgtc
gcagttgctaacccggcccagcaaactcttgaaagatgggccgtggagaatggagtgaat
ggagacttcaactccatctgccaaaacgcaaaggcaaaagcattcatacttggcgagctc
gttaaaacagctaaagagaaaaagttgaagggttttgagatcattaaagctgttcatcta
gaaccagttgctttcgacatggaaagagaccttcttacaccaacctacaaaaagaagagg
cctcaattgctcaaatactatcagagtgtgatagatgaaatgtacaagacaacaaaggaa
ggtcaagcttccggacagtag
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