Camelina sativa (false flax): 104707488
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Entry
104707488 CDS
T05044
Name
(RefSeq) protein FIZZY-RELATED 1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104707488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104707488
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104707488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
eIF2A
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_DCAF4
Aldo_ket_red
Beta-prop_SPT8
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_SCAP
Ge1_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104707488
NCBI-ProteinID:
XP_010422148
UniProt:
A0ABM0T7R4
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Position
8:complement(18792772..18795906)
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AA seq
474 aa
AA seq
DB search
MEEDESTPEKKIDSQLNLPPSMNRPTVSLESRINRLIDSNHYHSPSKPIYSDRFIPSRSG
SNFALFDLASSSPKKKDGKEDGAGSYASLLKTALFGPVTPDKSDVVNGFSPSRNIFRFKT
ETQRSLDLYSPFGSDEAPGVSPSPVKSPRKIPRSPYKVLDAPALQDDFYLNLVDWSAHNV
LAVGLGNCVYLWNACSSKVTKLCDLGVDDSVCSVGWSLRGTHLAIGTSSGTVQIWDAVRC
KSIRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRSQEDHVSKLKGHKSEVCGLKWS
FDNRELASGGNDNKLFVWNQHSTQPVLKYCEHAAAVKAIAWSPHVHGLLASGGGTADRCI
RFWNTATNTHLSCVDTNSQVCNLMWSKNVNELVSTHGYSQNQIVVWKYPTMSKLATLTGH
TFRVLYLAASPDGQTIVTGAGDETLRFWNVFPSPKSQNRESEIGASSFGRTTIR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatgaatcaacaccggagaagaagatagattctcagctgaatcttccaccg
tcgatgaatcgaccgacggtctcactcgagtctcgaatcaaccgtttaatcgattcaaac
cattaccactctccttcgaagcctatttactcagataggtttatccccagtagatctggt
tccaatttcgctcttttcgatctcgcatcttcttcgccgaagaagaaggatgggaaagaa
gacggggctggttcatacgcgagtcttttgaaaacggcgctttttggtccggtgacgccg
gataaaagcgatgttgttaatgggttttctccgtcgcggaatatttttaggtttaagacg
gagacgcagaggtctttagatttgtattcgccttttggttctgatgaggctcctggtgtt
agccctagtcctgttaagtcgccgaggaagattcctaggtctccttataaggtattggat
gcgccggctctacaagatgatttttacttgaatctcgtagattggtccgcacataatgtt
cttgcagtaggattagggaactgcgtgtacttgtggaatgcttgtagtagcaaggtaact
aagttatgcgatcttggggtcgatgacagtgtttgctctgtgggttggtcactacgtgga
acacatttggcgattggaactagtagcggaacagtacagatctgggatgcggtacgatgc
aagagcataagaacaatggaaggtcatcgtctaagagttggagccttggcatggagttca
tcacttctgtcttctggtagtagagacaagagtatacttcagagggacataaggtctcaa
gaagatcatgtcagtaagctaaaaggtcacaaatccgaagtatgtggactcaaatggtct
tttgacaatcgcgagttagcatcaggcggaaatgacaataagctttttgtatggaaccaa
cattcaacacaaccggttttgaaatactgtgaacatgccgcagcagtgaaagccattgcc
tggtcaccacatgttcacgggcttcttgcttccggtggcggcactgctgatagatgtatt
cgtttctggaacacagcgacaaacactcatttaagttgcgtagacaccaacagtcaggtg
tgtaatctgatgtggtctaagaacgtgaatgaacttgtgagcacacacggatattcccag
aaccaaatcgtcgtttggaaatatccaaccatgtctaaattggcaactctcactggtcac
acgttccgcgttctgtaccttgcagcctcacccgatggacagacgattgtgacaggagca
ggagatgaaacccttagattctggaatgtcttcccttccccgaaatctcagaacagggaa
agcgaaatcggggcatcatcttttggtagaacaacaatccggtga
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