Camelina sativa (false flax): 104707561
Help
Entry
104707561 CDS
T05044
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X2
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104707561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104707561
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
104707561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
104707561
NCBI-ProteinID:
XP_010422237
LinkDB
All DBs
Position
8:19669553..19672129
Genome browser
AA seq
540 aa
AA seq
DB search
MSYCLQLKPACIGCQSQSDLYGSSCRHMTLCLKCGKTMAENKAKCLDCGTVLTRLIREYN
VRAAAPTDKNYFIGRFVTGLPNFKKSSENKWSLRKDIPQGRQYTDAQREKLKNKPWILED
ETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN
RRKTADGYQRWMMKAANNGPALFGEVDNDKEAGGSSGGGGRGRKKSSGGDEEEGNVSDRG
DEDEEEEASRKSRLGLNKKSNDDDEENPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG
NDPEEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKSNGLNESDEDD
DDDSEEEEETNVSPVTNLKQKEVAKEEPVETAPAKPAPSGPARGTPPAKPSKGKRKLESD
SKKPSSSVQKKVKTENDPRSSVKEERTNTVSKSNTPTKSVKAEPASAPASSSAATGPVTE
DEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKTAFADILRKISKIQKNANSQNFVVLREK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtactgtttgcaattgaaaccggcttgtataggatgtcaatcacaatccgatttg
tatggaagctcttgcagacacatgaccttgtgtttgaagtgtggtaaaaccatggctgag
aataaagctaagtgtctcgattgtggaaccgtcctcacacgtttgattcgggaatataac
gttcgtgcggcggcaccgacggataagaactacttcataggtagatttgtgactggtctt
cctaatttcaagaaaagctctgagaataaatggtctcttcgtaaagatataccacaaggt
cgtcagtatactgatgcacaaagggagaagttaaagaacaaaccttggatcttggaagat
gagactggtcagtttcagtatcaaggacatcttgaaggctctcagtctgcaacttactat
ctcttagtgatgcagaacaaagagtttgttgcgattcctgctggttcttggtataacttc
aacaaggtggcacagtataaacaacttacattggaagaagcggaagagaagatgaagaat
cgtagaaagacggctgatgggtatcaaaggtggatgatgaaagctgctaataatggtcct
gcgttatttggagaagttgataatgacaaagaggccggtggaagcagtggaggtggtggc
aggggtcgtaaaaagtcttcaggcggtgatgaagaagaaggaaatgtctctgatagaggg
gacgaagatgaagaggaagaggcgtcacggaaaagtagacttgggcttaataaaaagagt
aatgatgatgatgaagaaaatccaaggggtggtgaccttgatatggatgatgatgacatt
gagaagggggatgactgggagcatgaggaaattttcaccgatgatgatgaagcagttggt
aatgatcctgaggaacgtgaagaccttctggctcctgagattcctgctcctccagaaatt
aagcaggatgaagatgatgaagaaaacgaagaagaggagggagggttgagtaaatctggt
aaagagttaaagaaactgctcggtaagtctaatggtttgaatgaatctgacgaagacgat
gatgatgattcagaagaggaggaggagacaaacgtcagtccagttacgaatttaaaacag
aaggaggtggcgaaagaagaacctgttgaaactgcacctgcaaaacctgcaccatctgga
cctgctcgtggaacacctcctgcaaaaccatctaagggaaagagaaaactagaaagcgat
tctaaaaagcctagcagctctgttcaaaagaaagtaaagactgaaaacgatccgagatct
tcagtgaaggaagagagaacaaacacagtttcaaaatccaacacaccaacaaaatcagtg
aaagctgaaccagcttcagctcctgcatcatcctcagctgcgaccgggcctgtaactgaa
gacgaaatacgggcagttctgatggagaagaagcaagtcactacacaggatcttgtttcc
aggtttaaggcaagacttaagaccaaagaggacaagactgcttttgccgatattctgagg
aagatctccaagatacagaagaacgctaattctcaaaacttcgtcgtcctgagagaaaaa
tga
DBGET
integrated database retrieval system
