Camelina sativa (false flax): 104707648
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Entry
104707648 CDS
T05044
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104707648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104707648
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104707648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_VPS8
NBCH_WD40
Beta-prop_WDR75_2nd
Utp12
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_DCAF12
WD40_like
MIOS_WD40
WDCP
VID27
Motif
Other DBs
NCBI-GeneID:
104707648
NCBI-ProteinID:
XP_010422335
LinkDB
All DBs
Position
8:complement(20384681..20391254)
Genome browser
AA seq
910 aa
AA seq
DB search
MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIR
ALASYRDYTFAAFGNEIAVFRRAHQVATWSKHVAKVDLLLLFGEHVLSLDVEGNVFIWAF
KGIEEHLAPIGNLQLTGKFTPTSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYEFKGW
GSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHAARGAVTALSFSTDGRPLL
AAGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASSDNSLKMWIFDTN
DSDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQEQQSRELSQRHISRR
AKKLRLKDEELKLKPVVSFDCAEIRERDWCNVVTCHMDTAEAYVWRLQNFVLGELILKPC
PENPTPIKACAISACGNFAVVGTAGGWIERFNLQSGISRGSYFDISEKSRYAHDGEVIGV
ACDSTNTLMISAGYHGDIKVWDFKKRELKSRWDVGCSLVKIVYHRVNGLLATVADDFVIR
LYDVVTLKMVREFRGHTDRVTDMCFSEDGKWLLSSSMDGSLRIWDVILAKQIDGVHVDVP
ITALSLSPNMDVLATAHSDQNGVYLWVNQSMFSGLPSVDSYASGKDVVNVKLPSVSALTS
SEADDDMETQVLESSEAPQASSFSISPKQIPELVTLSLLPKSQWQSLINLDIIKARNKPI
EPPKKPEKAPFFLPSIPSLSGDILFKPNDSEADGENEEKNKKDQDNMKNFDALESPFSKL
LKSSWDSKHFLDFTNYIKSLSPSALDMELRMLEIIDEEDIEEIIKRPEFISIGQLLDYFI
NEISCKNDFEFMQAVVKLFLKIHGETIRCHPSLQEKAKALLETQSLVWQKMDKLFQSTRC
IVTFLSNSQF
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcttcgaaccgtttagagctataggttacataaccagtacggttcctttctcc
gtccagcgattgggtaccgagaccttcgtcaccgtcagcgttggcaaagcttttcagatt
tataattgtgccaagctcaatcttgtcatcatcagtcctcaactcccaaagaaaattaga
gctctagcgtcttaccgagactacacttttgctgcttttggaaatgaaatcgctgtcttt
aggcgtgctcatcaggtagcaacttggagcaaacatgttgctaaagttgacctgctattg
ttgtttggagaacatgtgctaagtcttgatgttgaaggaaatgtgttcatttgggcattc
aaaggaatcgaagaacatctagctcccattggaaatcttcagcttactggaaagtttacc
ccgacctctattgttcacccagatacttatctgaacaaggttcttgtagggagccaagag
ggtccgttgcagctatggaacataaatactaagaagatgctctatgagttcaagggttgg
ggttcatctgtcaccagttgtgtttcgtcccctgctctggatgttgttgccattggttgt
gctgatggaaagatccatgtgcataacataaaattggacgaagagatcgtaacatttgaa
catgccgctcgaggtgctgttactgctttgtctttcagtacagatggacgtcctcttctt
gcggctggaggttcctttggtgtcataagcatctggaatcttaacaaaaagaggcttcag
tcagtcataagggatgcacatgacagttctataatctcattgaactttttagcaaatgag
cccgtgctaatgagtgcatcatcagataactcactcaaaatgtggatatttgacacaaat
gattctgatcctcgcctattacgcttccgctctgggcatagtgctcctcctttgtgtatc
aggttctactctaatggacggcacattttgtctgctggccaggatcgtgccttccgcctg
ttctcggtcatccaagagcaacaaagtagagagctttctcaaagacacatatccaggcga
gccaaaaaactcagactgaaggacgaagagcttaaattgaagcctgttgtttcatttgat
tgcgctgaaattagggagcgtgattggtgcaatgttgttacttgccatatggatacagca
gaagcatatgtatggagacttcagaactttgttcttggagagcttatcctcaaaccatgc
cctgagaatccaacaccaattaaggcatgtgcaatcagtgcctgtggaaactttgcagta
gtcggaacagcgggtggatggattgagagatttaacctccaatctggaatcagccggggt
agttacttcgatatttcagagaaaagtaggtacgcccatgacggagaagttattggagtt
gcttgcgactccacaaatacactcatgataagtgcaggatatcatggggacataaaggtt
tgggatttcaaaaagcgggaattaaagtcccggtgggatgttggatgttcattggttaaa
attgtctaccaccgtgtaaatggtcttttggctacggtggcagatgattttgttatccgt
ttgtatgatgttgtgacgctaaagatggttcgtgaatttagaggtcatacagaccgtgta
acggatatgtgctttagtgaggatggcaagtggctcctctcatctagcatggacggaagt
cttagaatttgggatgtcatattggcaaagcagattgatggagtgcatgtcgatgtacca
ataacagcattgtctttatcaccaaatatggacgttttggcaactgcccactctgatcag
aacggggtctacttgtgggttaaccaatccatgttctctgggcttccgagtgttgattct
tatgctagtgggaaagatgtcgtaaatgttaaattgccttcagtctctgcgttgacatct
tctgaagctgatgatgatatggagacgcaagttttagaaagttctgaagctccacaagct
agcagtttctcaatttcccctaagcagatcccagaacttgttactctatctctattgcca
aaaagccaatggcagagtttgatcaacttggatataataaaggcccgcaataaaccaata
gagcctcccaaaaaacctgaaaaggctccttttttcttgccctcaattccttcgctttct
ggagatatattattcaagccaaatgactcggaagctgatggggagaatgaggagaagaat
aaaaaggaccaggataacatgaagaactttgatgcattggaatctccattctcaaaactt
ctcaaatcctcatgggattcaaaacactttttagatttcaccaactacataaagagttta
tccccgtcagccctcgatatggagctacggatgctggaaatcatagatgaagaagatatt
gaagagattatcaaaagacctgagtttatatcgattggacaactcctggattacttcatc
aacgagatctcttgcaaaaacgactttgagtttatgcaggcggttgtgaaattatttctc
aagatacacggtgagaccataaggtgccacccaagtttacaagaaaaggcaaaggcgctt
ttagaaactcagagtttggtgtggcagaaaatggataagcttttccagagcacaagatgc
atagttacctttcttagcaattcacagttttga
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