Camelina sativa (false flax): 104707706
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Entry
104707706 CDS
T05044
Name
(RefSeq) DNA damage-binding protein 1a
KO
K10610
DNA damage-binding protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104707706
09124 Replication and repair
03420 Nucleotide excision repair
104707706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104707706
03400 DNA repair and recombination proteins [BR:
csat03400
]
104707706
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
104707706
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104707706
TCR (transcription coupled repair) factors
Cul4-CSA complex
104707706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
104707706
NCBI-ProteinID:
XP_010422430
LinkDB
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Position
8:20876754..20883587
Genome browser
AA seq
1088 aa
AA seq
DB search
MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVL
YQDNKDARHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANAFKAIPIRPSITKAYGRVDVDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAVVFVGSSYGDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLE
RQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS
FISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR
DEWHAPAGFAVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPI
GDNPNYSQLASVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCTFEGISYLLCAL
GDGHLLNFQLDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICH
QEQTRTFGICSLGNQTNAEESEMHFVRLLDDQTFEFISTYPLDSFEYGCSILSCSFTDDK
NVYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAIN
QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGA
IEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLG
EFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVI
KGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKR
VEELTRLH
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatggaactacgttgttacggctcacaaaccgaccagtgtgactcactcttgc
gttggcaacttcaccagtcctcaagagcttaatctcattgtagcgaaatgtactcgaatt
gagatccatttgcttaccccacaaggacttcagcctatgttggatgttcctatatatgga
agaatcgctactctggaattgttccggccacatggcgaagcgcaagactttttgttcatt
gcaacggagagatacaaattctgtgttcttcaatgggatgctgagtcctctgagcttatt
acaagagcaatgggggatgtttctgatcgtataggccgaccaacagacaatggtcagatt
ggcataattgatccagattgtagattaattggactccatctgtatgacggcttgttcaag
gttattccttttgataacaagggacagctcaaggaagcttttaatatcaggctagaggaa
ttgcaggttctggatatcaagtttctgtttggatgtgcaaagcctacaattgcagtactt
tatcaggataacaaagatgctcgtcatgtcaaaacatatgaagtatctctaaaagataag
gattttgtcgagggtccatggtcacagaataatctcgacaatggtgctgatctactgatt
cctgtaccaccacctctctgtggtgtccttattatcggcgaagaaacaattgtctattgt
agtgctaatgcattcaaagcaataccaataagaccttctatcactaaagcatatggaaga
gttgatgttgatggctctaggtatcttcttggtgaccatgctggattgattcatctgctt
gttataacacacgagaaagaaaaggtcactggcctcaaaattgagcttttgggtgaaacg
tccattgcttcgactatatcgtaccttgacaatgccgttgtctttgttggctcaagctat
ggcgactctcagctagtaaagctaaatctacatcctgatgcaaaaggctcatatgtagaa
gtcttggaaaggtatatcaacttggggcctattgtcgacttttgtgtagttgatctcgag
agacaggggcaaggtcaggttgtaacttgttctggagcatttaaggatggttctcttcgc
gtagttcgcaatgggataggaatcaatgaacaggcctctgtggaacttcaaggtatcaaa
ggaatgtggtcattgaaatcttcaattgatgaagccttcgacacattccttgtagttagc
tttatcagtgaaactcgtatcttagccatgaatcttgaggatgaactggaagaaacagag
attgagggcttcttatctcaagtgcagactttattttgccatgacgctgtgtacaatcaa
cttgtacaagttacctcaaattctgttagactagtcagttctacaactagagaattacgg
gacgagtggcatgccccagctggattcgctgttaatgttgcaactgcaaatgccagccaa
gttcttttggcaactggaggtgggcatttggtttatctggaaattggagatggtaaatta
acggaagtgcaacatgcccttttggagtacgaggtttcctgccttgatataaatcctatc
ggtgataatccaaactacagtcagctagcttcagttgggatgtggacagatataagtgtg
agaatcttttcgctgccagaattgactcttattacaaaagagcaactaggaggggagata
attcccagatctgttcttctttgtacatttgaagggatatcttacttgctgtgtgctctt
ggagatggtcatcttttgaacttccagttggatacaactacggggcagttaaaagacagg
aaaaaagtatcacttgggactcagcctataactctgcgtacattttcatcaaaaagcgcc
acacatgtctttgctgcatctgatagaccaaccgtaatctatagcagcaacaagaagctg
ttatacagtaatgtcaatcttaaagaagttagtcatatgtgtcctttcaactctgctgct
tttcccgacagtttagcgattgccagggaaggtgaacttactattggtaccattgatgat
attcagaagcttcacatacgcactattcctcttggagagcatgctcgtcgaatctgccat
caggagcagacgcgtacatttggtatctgcagtttgggaaaccagacaaatgctgaagaa
tctgaaatgcactttgtccgtcttttggacgaccaaactttcgagtttatttcaacttac
cctctggattcttttgaatacggttgctccattctgagctgctctttcacggacgataaa
aatgtctattactgtgttggaaccgcatatgttttaccggaagaaaatgaaccaacgaag
ggaaggatcttagtatttatagttgaagatgggaggttgcagcttattgctgagaaagaa
acaaaaggagctgtttattccctcaatgcctttaatggaaaacttcttgctgctattaat
cagaagattcagttgtacaagtggatgctgcgggatgatggcactcgtgaactgcagtct
gaatgcggacatcacggtcacattttagctctctatgtccagacccgtggagactttatc
gttgttggtgatctcatgaaatcaatctccttattgttatacaagcacgaggaaggtgca
atcgaggagcgggctcgggattacaatgcgaattggatgtcagcggttgagatacttgat
gatgatatttaccttggtgctgagaacaatttcaatctgttaacagtgaaaaagaacagt
gaaggagctactgatgaagaacgagggaggttagaggtagttggagagtatcaccttggg
gaatttgtgaacagattccgccatggatctctagtaatgaggctacctgattcagagatt
ggtcagatcccaacagtcatctttggtacagtcaatggagtgattggagtaatagcttca
cttcctcaagaacagtatactttcttggagaagttacagtcaagtttgaggaaagtgatt
aaaggagttggcggcttaagccacgagcaatggaggtcgtttaataacgagaaaagaacc
gcagaagcgaggaatttcttggatggtgacttaatcgagtcgtttctggatctgagtagg
aacaagatggaggacatatctaaatccatgaatgttcaagtggaagagttgtgtaagaga
gttgaggaactcactaggcttcactga
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