Camelina sativa (false flax): 104707963
Help
Entry
104707963 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
csat
Camelina sativa (false flax)
Pathway
csat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104707963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104707963
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104707963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
AbiEi_3_N
Motif
Other DBs
NCBI-GeneID:
104707963
NCBI-ProteinID:
XP_010422729
UniProt:
A0ABM0T936
LinkDB
All DBs
Position
8:complement(22721010..22724056)
Genome browser
AA seq
509 aa
AA seq
DB search
MYTVKSQCLLDGQKNGTVLSASPLPDENFGSSLASSKGGNSAVPSSSISSMMGGVVGVDS
TWKLFNEDSTSVEEGVVIFVTYQTGLVVKLIPNLEVYAQLPRPEGVREGSMPYTAWTCST
GNSSKEAEDRVSFLVIAWDRRVQVAKLVKSDLKEYAKWSLDSPAIGVVWLDDQLLVIPTV
SGHLYLFTRDGVVIHQTNFSVAGSSGNDLISYHTYFTNVFGNPEKAYQNSVGVRGASVYI
LGTAHLIISRLLPWKERVDVLRRGGDWMGAFNMAMSLFNGQAHGVVDLPKTVDAIREAIA
PSLAELLFSYVDEVFSYISIAFSNQIEKNGVTHEQSSGTNNVNLEIEEQYNRVGGVAVEF
CVHINRMDLLFDEIFSRFVAVQQRDTFLELLEPYILRDMLGSLPPEIMQALVEHYSRKGW
LQRIEQCVLHMDISSLDFNQVVRICREHGLYGALLYLFNKGLDDFRSPLEELLIVLRNSE
QQRATAIGYRMLVYLKYCFLGLAFPPGRI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtatacagtaaaatcgcagtgtcttctcgatggacaaaaaaatggaacggtcctctcg
gcatcacctttgcctgatgaaaattttggaagctccttggcctcttctaaggggggtaac
tctgcagttccatccagcagtataagtagcatgatgggaggtgttgttggggttgattca
acttggaagctctttaatgaggattcaacttcggtggaagaaggtgttgttatatttgtc
acctatcaaactggactagtggtaaagctcattccaaatttggaggtgtatgcacaactt
cctaggccagaaggggttcgggagggttccatgccatacactgcctggacatgctctacg
ggaaattcttccaaggaggcagaagatagggtttcttttcttgtcattgcgtgggatcgt
agagttcaggttgccaagttggtaaaatcagaccttaaggaatatgccaaatggtcactt
gacagtccagctattggtgttgtttggctagatgaccagttgctggtgatcccaactgtg
tcgggccatttgtatctgttcacaagagatggtgtggtaattcaccagacaaacttttct
gtggctggttcttctgggaatgacctaatttcctatcatacgtactttacaaatgtcttt
ggaaatcctgagaaagcttatcaaaactctgtgggtgtcagaggggcttcagtatacatt
ctcgggactgcgcatcttattatctccagacttttgccgtggaaggagcgggttgatgtg
ttaaggagaggaggtgactggatgggtgcatttaacatggcaatgtcactttttaatggt
caagctcatggggttgttgacctccccaaaactgtggatgccataagggaagccatagca
cccagtttagcagagttgctattttcctacgtagatgaagtattttcttatatctcaata
gcattttccaatcagattgaaaaaaatggagtaactcatgagcaaagcagtggaaccaat
aatgtcaatttagagatagaagaacaatacaatcgtgttggtggtgttgccgttgaattc
tgtgttcatattaacaggatggatttgctctttgatgagatattttccagatttgtggct
gtacaacaaagagatacatttttggagcttttggagccttatatattgagggatatgctt
ggatctcttcctcctgagattatgcaagcgctggttgaacattatagtaggaaaggatgg
ctacaaagaattgagcagtgtgtacttcacatggatatttcttccttagatttcaatcag
gtagtcagaatttgccgtgagcatgggctttatggggccttgctctatcttttcaacaag
gggttggatgatttcaggtcacctctggaggaactcctgattgtcttacggaacagtgag
caacaaagggctacagccattgggtaccggatgcttgtttatctaaagtactgctttctt
ggtttggcttttcccccaggtaggatttaa
DBGET
integrated database retrieval system
