Camelina sativa (false flax): 104708191
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Entry
104708191 CDS
T05044
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104708191
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104708191
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104708191
NCBI-ProteinID:
XP_010423016
UniProt:
A0ABM0T9T0
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Position
8:23675877..23677087
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AA seq
297 aa
AA seq
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MTGNIGKGVAQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLLSS
FTTLDGRGASVHISGPACLIVYKATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGKVDG
DAIRLVTAKKVWIDHNTLYDCEDGLLDVTRGTTDVTVSNNWFRNQDKVMLLGHEDGYVRD
KDMKVTVVFNHFGPNCNQRMPRIRYGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVA
PKSGRKEVLEKHGLITAQIKGSQSQTLKPLKNSQVQLEPYTAPGTPSVRTTTLNITF
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaaatatcggtaaaggagtcgcacagtacaaagtaaccgacccttctgatgat
cctctgaatccaaaacctggaaccctaagatacggagcaacactcgtcaaaggtaaaaaa
tggatcacattcaagagaaacatgaagatcaagcttcataaaccacttctactcagcagc
ttcacgacactcgatggccgaggtgctagtgttcatatctcgggtcccgcttgtctcata
gtctacaaagccacagatgtgatcattcatggacttaagatccatgattgtaaagctcat
ccaccaagctcagtgatgggaccagactcaaagatcattcaacttggaaaagtggacggc
gatgcgattagattggtcacggctaagaaagtatggatcgaccacaacacgctctatgat
tgtgaagacggtcttctagacgtcacacgagggactactgatgtcacagtgtcgaacaat
tggtttaggaaccaagacaaggtcatgcttcttggacacgaggatggctatgtaagagac
aaagacatgaaagtcactgttgtgtttaaccactttggtcctaattgcaaccagagaatg
ccaagaattagatatggatatgctcatgttgctaataactattaccaaggatggactcaa
tatgcaattggaggaagcatgagccctcgtgtgaagagtgagtcaaactacttcgtcgcg
ccaaaatctggacgcaaagaggtgttggaaaagcacggcctaattacggcccagatcaaa
ggttcacagtcgcaaacgctaaaaccgttaaagaactcacaagttcagctggagccttac
actgcaccaggaactccgtctgttagaacaacaacgcttaacataactttttag
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