Camelina sativa (false flax): 104708237
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Entry
104708237 CDS
T05044
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
csat
Camelina sativa (false flax)
Pathway
csat04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104708237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104708237
Membrane trafficking [BR:
csat04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
104708237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_5
AAA_22
NPHP3_N
nSTAND3
RuvB_N
NACHT
AAA_19
Mg_chelatase
IstB_IS21
AAA_14
ATPase_2
RNA_helicase
Bac_DnaA
AAA_18
AAA_7
AAA_2
AAA_11
AAA_24
AAA_30
AAA_28
NB-ARC
ATPase
ORC-CDC6-like
DEAD
ResIII
Sigma54_activat
Zeta_toxin
MCM
KTI12
SLFN-g3_helicase
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-GeneID:
104708237
NCBI-ProteinID:
XP_010423077
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All DBs
Position
8:complement(23887901..23895179)
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AA seq
1129 aa
AA seq
DB search
METEAVVRTVAGVDCFVSLPRQLLHALQSTSSSPLPPLLPVELRSGDRRWSVAWSGSSSS
SSAIEVARVFAESISLPDGTVVQVRVLPNVPKATLVTVEPDTEDDWEVLELNAELAEAAI
LSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLNAKK
SSDAVAPDKECNNLKVLLRVQDTDKSAFHEADVKGFELRVALTSIAYIHPDTATKYSLES
LQLISVSPRIPLKGSAKKDEALNMKDSEASKVAENGTPSAKKEPRQAILRLVYSDLAALG
HLMMPESLRLYLGAGLHSWVYLRGCNVKVDKEIPAFSLSPCVFKISEKEKVLDRGTNILG
NHNSSRKGSHPPSGLSTYMDVVDWSGHDKVVTALLSEGLHDRGNQDNAYQVKNKKGLECL
TRLWSLAQLDAIASVTGVDVSSLIVGRETFFHLEVRGLESYKSRDRQSSVNDCWESGKND
KNAPLEILYVMTVSDESSLGDKFAVYELSLDRSEKRDNVVHIEPVLAKMSLGDPIYLTTS
PKETHFNKGVSPDISSLTWMGPIVLDVIKRMTVLLSPAAAMWFSKFSIPSPGHILIYGPP
GSGKTILARAAAKYFEEQKDLLAHVILVSCSALALEKVQHIHQVLSGVIAEGLEHAPSVI
ILDDLDSIISSSSDTEGTHASVGITMLTKFLTDVMDDYGEYRNFSCGIGPLAFVASVQSL
EQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLECSEDILLDLAAKCEGYDAY
DLEILVDRAVHAAIGRHLPCESNNLSKYSLVKEDFTRAMHEFVPVAMRDITKSASEGGRL
GWEDVGGVTDIKNAIKEMIELPSKYPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAA
CSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVT
DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLMCDFPSPPERLEIL
TVLSRKLPMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEFLNREDKPETGTTPII
TDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSSRESKGKRATLA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggaagcggtggttcgtaccgtcgccggcgtagactgtttcgtctcattacca
cgtcagctactccatgcgcttcaatccactagctcctcccctcttcctccgcttctccct
gttgagctacgctccggtgaccgccgttggtcagtagcttggtccggctctagctcatcc
tcttctgcgatcgaggtcgctcgagtgttcgcggaaagcatatcgttgccggatggtaca
gttgttcaagttcgtgttcttcccaatgtgcccaaggctactttagtaacagtggaacca
gatactgaagatgactgggaagttcttgagctcaatgctgaacttgccgaagcagctata
cttagtcaggtgaggatactacacgagaccatgaaattccctttgtggttgcatgaccga
actgtgataagattttccgtggtttcaacatttccatcaaaaggggtggtacaacttgtg
ccaggaactgaagtggctgtggctccaaagagacgtgacagaaacctcaatgcaaaaaag
agttctgatgctgttgctccagataaagagtgtaacaatctgaaggttctattacgtgta
caagatactgataaatcagcctttcatgaagctgatgtcaaaggatttgagctaagggta
gctctcacttccattgcctatattcatccagatactgccacgaaatactctctagaatct
cttcagttgatttctgtatcccctagaatacctttgaaaggtagtgcaaaaaaggatgaa
gccttaaatatgaaagacagtgaagcttcaaaggtggccgaaaatggcactccaagcgca
aagaaagagccccgtcaagcgattcttcgtcttgtctattcagatttagctgctctagga
catctaatgatgcccgagtctcttcgtctctatctaggagcaggcctacactcatgggtt
tacttaaggggatgcaatgtaaaagtagacaaagaaattcctgctttttcactttctcct
tgcgtcttcaagatttctgaaaaggaaaaggtgctggatagaggtacaaatattcttggt
aatcataattctagtagaaaaggcagtcatccaccatctggcttgagcacctatatggac
gttgttgactggtctgggcacgataaggttgttacagctcttttatctgagggtttgcat
gacagaggaaaccaagataatgcctatcaagttaagaataaaaaaggattggaatgcctt
actcgcctgtggtcattggcacagcttgatgctattgcgtcagtcacaggagttgatgtt
agttcgttaattgtaggaagagaaacatttttccatttagaagtaagagggctcgaatct
tataaatcaagagataggcagtcttctgttaatgattgttgggaaagtgggaagaatgat
aaaaacgctcctttagaaattttgtacgtcatgacggtctctgatgagtcttcacttggt
gataaattcgctgtgtatgagcttagcctggatagaagtgagaagagggacaatgtggtg
catattgagccagtgcttgcgaagatgagtcttggtgacccgatatatttgacgacgtct
cctaaagaaacacactttaataaaggtgtttccccggatatatcttccttgacgtggatg
ggcccaattgtgttggatgttatcaagcggatgaccgtgttgttgtctcctgcagccgca
atgtggtttagcaagttcagtattccatcacctggacatattctcatatatggacctcct
ggttcaggaaagacaatattggcgagagctgctgcaaagtacttcgaagaacagaaagac
ttgttggcacatgtgattctggtatcttgttctgcacttgccttggagaaggttcaacac
atccatcaagtcctttctggtgtaatagctgagggtttggaacatgcaccatctgtcatc
attttggatgatcttgatagcattatctcatcctcttcagataccgagggaacacacgct
tcggttgggattacgatgcttacgaaattcctaacagatgttatggatgattatggggaa
tacaggaatttttcttgtggaattggtccacttgcatttgttgcttctgtccagtctctg
gaacaaattccacagacattgagctcatcaggaaggtttgacttccatgtgcaactggct
gctcctgctacctcagaacgtggggccatactgaagcacgagatacagaaacgcctttta
gaatgttcagaagacatattgcttgacttagctgctaaatgtgaaggatatgatgcgtat
gacttggaaatattggttgatagagctgttcatgctgccattggccggcatctaccttgt
gaatcaaataatctatccaaatattctttggtcaaagaagactttactcgagctatgcat
gaatttgtgcctgttgccatgcgtgacatcacaaaatctgcgtctgagggtggtcgtttg
gggtgggaagatgtgggaggtgtgactgatattaaaaatgctatcaaagagatgattgag
ttgccatcaaaatatccgaaaatctttgcaaaatctcctctgcgtttgagatcgaatgtt
ctcttgtatggcccacctggttgtgggaagactcacattgttggtgcagctgctgccgcg
tgttccctacggtttatatcggtgaaggggcctgagctgttaaacaaatacattggtgca
tctgaacaagcggtccgtgatatattttcaaaagcagcagcagcagcaccgtgcatactc
tttttcgatgaattcgattccattgctccgaagagaggacatgacaacaccggtgtaact
gatcgagttgttaatcaatttctgacagaactggatggagttgaagttctgaccggggtc
tttgtttttgctgcaacgagtagaccagatttacttgatcctgcgctcctaaggcctggt
cggcttgatcgtttgcttatgtgcgactttccttccccaccagaacgattagagattctt
acagttctttcgagaaagcttccgatggctgatgatattgacttagaacctatagctttg
atgactgaaggcttcagtggagctgatcttcaagctcttctctcagatgcccagcttgca
gctgttcacgagtttctgaacagagaagataaacccgaaaccggaactacgccaataata
accgatcctcttctgaagtcgatcgcttcaaaaactaagccatcggtttccgaaaccgag
aagcaaaagctctatgacatatatagccagtttctggattcaagaaaatcgtcaagggaa
tcaaagggcaaaagagcaaccttggcataa
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