KEGG   Camelina sativa (false flax): 104708249
Entry
104708249         CDS       T05044                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csat04812]
    104708249
Cytoskeleton proteins [BR:csat04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     104708249
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 WDR90_beta-prop_4th eIF2A WD40_RFWD3 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_WDR19_1st PROPPIN Beta-prop_VPS8 PAN2_N VPS8_N
Other DBs
NCBI-GeneID: 104708249
NCBI-ProteinID: XP_010423095
LinkDB
Position
8:complement(23956526..23962751)
AA seq 839 aa
MNTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS
GIDSVTFDASEGLVAAGAASGTIKLWDLQEAKVVRTLTGHRSNCIAVNFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGINVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE
FKSHEGQIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK
SVLCGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSR
TEPMSGGANQSNSHPEKTSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKLS
VSQNSDSLPKETKSTGRSSVSQSSDPLVKEPKPHGKLSVTHSADAVKESRTLSSTGGISD
SPSPRRVTLTNDPKIASGVSTVVPTAAASKRNFGKANPKANPPVVNKEDYFQVIVPRTDP
IIEQASESRAELDIIGRTMPYSLQSKAADSRRLLSSRNEPDRPTSSLLERSQSQPIEPNT
LQDANTYPSDEGGTWDTAGRTTKDNRYRGYGRFSSRSLVRSPPSNYDQSSDLSSYNANRD
SSPTESRKGGRLHSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNIRSPNMQRGNHVPVDQ
GITSVSEEDIAADIMGQHDQFVSSMQSRLAKLQVVRRYWERNDIKNSISSIEKMADNAVI
ADVLLIVNERPEILTLDTCTSLLPLLTALLGSNVDRHLSVCLDLLLKLVRMYGSQIYSSL
SAPSSVGVDIEAEQRMERYSCCFVELEKIKACLPSLARRGNLVAKTLHELNLTFQEVSS
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgaacaccaagcgcgcctacaagctccaggaatttgtggcacattctgctgctgttaat
tgtcttaagattgggaggaagtcctccagggttcttgtaactggtggggaagatcacaag
gtcaatctttgggctattggtaagcccaacgccattctgagcttgtatgggcattcgagt
gggattgattcagtaacgtttgatgcttcggaaggcttagtagcagcaggagctgctagt
ggtacaattaaactttgggatctccaggaggcaaaggttgtcagaactctcactggtcac
aggtcgaattgcatagccgtgaattttcacccttttggcgagttttttgcttctgggtct
ctggacacaaatcttaagatatgggatataaggaagaagggatgcatccatacttacaag
ggtcacactcgagggatcaacgtactcagattcactccagatggtcgttggattgtttct
ggaggagaagataatgttgtcaaggtgtgggatttgactgctggaaaacttttgcacgag
tttaagagtcatgaagggcaaattcagagtctagattttcatccccatgaatttctgcta
gcaacaggttcagctgataagactgtaaaattctgggaccttgaaacattcgagcttatt
ggttctggtggaactgagactactggggtccgatgcctgaccttcaatccggacggaaag
agtgtgctttgtggattgcaagaaagtctcaaaattttctcttgggagccaataagatgt
catgatggagtggatgttggatggtcaaacttgtcggatatgaatgttcacgagggaaag
cttcttggttgctcatacaatcaaaattgtgtaggcgtgtgggttgtggacctctcgcgc
actgagcctatgagtggaggcgccaatcagtcaaattcccatccagagaaaacatcaggc
tcaggcagagatcaagcaggtctgaacgataacagctcaaaggttattctcggaaagttg
cctggttcccagaaagtggatcctttattgaaggaaacaaagtctcttggaaaattatct
gtttctcaaaactcggattctttgccaaaagaaacaaagtctaccggaaggtcatcagta
tctcaaagttcagatcctttggtaaaggaaccaaagcctcacggaaagttgtcagttact
catagcgcagacgcagtaaaagagtcaagaaccttgtcatccacaggaggtatatcagac
tctcctagtcctcgcagggttactttgaccaatgatccgaaaattgcttctggtgtttct
acagttgtccctactgctgcagcttcaaagaggaattttggaaaagctaacccaaaggcg
aatcctccagtagtcaataaagaagattattttcaagtcattgtccccagaacagaccca
ataattgagcaggcatctgaatccagagcagaacttgacataattggaagaactatgcca
tattcactgcagtcaaaggctgctgattctcgaaggctgttgagcagcagaaatgagcca
gatcgaccaaccagttcgcttcttgaaaggtcgcagtctcagcctatagaaccaaacact
ttacaagatgcaaatacatatcctagtgacgaaggtggcacatgggatacagctgggaga
acaactaaagataacagatacaggggatatggaaggtttagttcaagatcattggtgaga
tcacctccgagcaattacgaccaaagttctgacttgagtagctataatgcaaatagagat
tcaagtcctactgaaagtcgaaaaggaggaagactgcactccctcgttctaaatagggaa
agaagaggaagattttcaaactttgagggtcctgtttcgagttcttctggaggaaatatg
actgcaccaaacattcgctctcccaatatgcagagaggaaatcatgtgccagttgatcaa
ggaatcacttctgttagcgaagaagatatagctgcagacataatggggcaacacgatcaa
tttgtcagctctatgcagtctcgcttggctaagttacaggtagtccgtagatattgggaa
agaaatgatattaaaaactcgataagttcgatagagaagatggctgataatgctgtcatt
gcggatgttctacttatagtaaacgagagacctgaaattttgacactggatacttgtacc
tcccttcttccccttttgacagctcttctagggagcaacgtggaccgtcatttgagtgtc
tgcctggatttgctgcttaagctggtaagaatgtatgggtcacaaatttactcgtcgctg
tcggctccatcatctgttggtgtagatattgaggctgagcaaaggatggagcggtacagt
tgttgctttgtagaactcgagaaaatcaaggcttgccttccctctttagcaagaagagga
aatttggtggcaaagactctgcatgaactcaacttaacatttcaagaagtttcatcgtga

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