Camelina sativa (false flax): 104708442
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Entry
104708442 CDS
T05044
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104708442
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csat01002
]
104708442
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104708442
Enzymes [BR:
csat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104708442
Peptidases and inhibitors [BR:
csat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104708442
Ubiquitin system [BR:
csat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104708442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH_2
MATH
UCH_1
ubiquitin
SASP
Motif
Other DBs
NCBI-GeneID:
104708442
NCBI-ProteinID:
XP_010423318
UniProt:
A0ABM0TAI2
LinkDB
All DBs
Position
8:24832444..24841699
Genome browser
AA seq
1115 aa
AA seq
DB search
MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAVSTVENQPVEDPPSLKFTWT
VPNFSRQNTRKHYSEVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF
SLAVVNQIHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA
VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA
SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE
GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
LKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRDSDKDKIICNVDEKDIAE
HLRVRLKKEQEEKEDKRRYKAQAHLFTIIKVARDEDLKEQIGKDIYFDLVNHDKVRSFRI
QKQTPFQQFKEEVAKEFGIPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASN
KANTAELKLFLEVEHLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSKPM
DITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQKPLVN
KEIECRYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAEKLALD
DASKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKIYKI
FPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFL
VIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGA
FEQYLGLEHTDTTPKRAYAANQNRHAYEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccgcctcccgttgatcagccagaagatgaggagatgcttgtgccg
aattcagatttggtcgacggtcctgctcagcctatggaagttacccaacctgagactgct
gtgagtactgtggagaaccagccagttgaggatcctcctagtctgaaattcacgtggact
gtcccaaatttctctaggcaaaacacaaggaagcattactctgaagtatttgtcgttgga
ggttacaaatggcgcatattaattttcccaaaagggaacaatgtcgaccatttgtccatg
tacttggatgtttctgatgctgcgagtttgccctacggttggagcagatatgctcagttc
agtttggctgtagtgaatcaaatccacaccagatataccattagaaaagagacgcaacat
cagttcaatgcaagagaaagtgattggggatttacatcattcatgcctcttagtgaactc
tatgatcctagtagaggatatttagtgaatgatactgttttggttgaagctgaagtcgct
gtacgtaaggttcttgattactggtcatatgactctaaaaaagagactggttttgttggg
ctcaagaaccaaggtgcaacttgttacatgaattctctcttacagacactataccacata
ccttacttcagaaaggctgtataccacatgccgacaactgagaatgatgcacccacagca
agtatacctttggctctccaaagtttgttttacaagctccaatataatgacactagtgtt
gcaacaaaagagctgacaaagtcgtttggttgggatacatatgattctttcatgcaacat
gatgtgcaagaactcaatcgagttctctgcgaaaagcttgaggacaaaatgaagggaact
gttgtggagggaacaatacaacagctatttgagggccaccatatgaattatattgagtgc
ataaatgtagatttcaaatctactcggaaagaatcattttacgaccttcagctagatgtt
aaaggctgcaaggatgtttatgcttcttttgacaagtacgttgaggttgaacgtcttgaa
ggagacaacaaatatcatgcagaaggacatggtttacaggatgcaaaaaaaggtgttctt
ttcattgactttccaccggttcttcaactccagctcaagaggtttgaatatgactttatg
agggacaccatggtgaagataaatgatcggtatgagttccctcttgaactggatcttgat
agagaaaatggaaagtatctatcccctgatgctgacaggagtgtccgcaacctttatact
cttcacagtgtcttagttcatagtggaggagtacatggtgggcactattacgcttttata
aggcctacgctctcagatcagtggtataaatttgatgatgaacgagtaaccaaggaagat
ttgaaaagggcattggaggagcaatatggtggtgaagaagagctcccacagactaatcct
ggtttcaataaccctcctttcaaattcacaaagtactcaaatgcatacatgcttgtatac
atccgggacagtgacaaagataaaataatctgcaacgttgatgagaaagacatagcagaa
catttaagggtgaggctgaagaaagaacaagaagaaaaggaagataaaagaagatacaag
gcacaagctcacctatttacgataatcaaggttgcaagagatgaagatcttaaggaacag
attgggaaggatatatattttgatcttgtgaatcatgacaaagttcgcagtttccggatc
cagaaacagacaccatttcaacaatttaaggaggaggtagccaaagaatttggaatacct
gttcagttacaaaggttctggatttgggcaaagcgacaaaatcatacatatcgtcccaat
cgcccccttacgcctcaggaagaattacaaccggttggacaaataagagaagcatctaac
aaggcaaacaccgcagaactgaagctttttctggaagtagagcacctggatttacgtcct
atccctcctcctgaaaaatcaaaagaagatattcttcttttctttaagctttatgacccc
gagaaggcagtattaagctatgctggcaggcttatggtgaaaagttccagtaagcctatg
gatataactggaaagctgaatgaaatggttggctttgctcctgatgaagaaatagaactt
tttgaggaaatcaagtttgaaccttgtgttatgtgcgaacacttggataagaaaacttca
ttcagattgtgtcaaatcgaagatggagatatcatttgcttccagaaacctctagttaac
aaggaaattgaatgccgatacccagctgtgccttcgtttcttgaatatgtccagaataga
cagctggtccggtttcgtgcgctggaaaaacctaaagaagatgagtttgttctggagttg
tcgaagctgcacacttatgacgatgtcgtggaaagagtggctgagaaacttgctcttgac
gatgcatccaaacttaggctcacatctcacaattgctattctcagcaacccaagcctcag
cctatcaaataccgtggagtagaccatttgtcagatatgttagttcactacaatcagacg
tcggacattttgtattatgaagttctggacattcctcttccagaattgcaaggtcttaaa
accttaaaagttgctttccatcatgccacgaaggaagaagtagtaatccacaatatcaga
ctacctaaacaaagcacggtcggagatgttattaatgaacttaaaacaaaggtggagctt
tcgcatccggatgcagaactgagattgctggaggtgttttaccacaaaatctacaagatt
ttcccatcaactgaaagaattgagaatataaatgaccagtactggactttacgagctgag
gagattccagaagaagagaagaacatcggtcctaatgatcgcttaattcttgtgtaccac
tttgctaaggagactggacaaaatcagcaagtgcaaaactttggtgaacccttcttcctg
gtaatccatgaaggtgaaactcttgaagaaatcaagaaccgcatccaaaagaagcttcat
gtatccgatgaggactttgccaagtggaagtttgcgtttatgtcaatggggcgtccagag
tacttgcaggacacagatgttgtttataatcgattccagagaagagatgtctatggtgct
tttgagcagtacctcgggttggaacacactgacactactcctaagagggcttatgctgca
aaccagaaccgacacgcatatgagaagccggtgaaaatatacaattag
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