Camelina sativa (false flax): 104708556
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Entry
104708556 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104708556
KO
K08518
syntaxin-binding protein 5
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104708556
Membrane trafficking [BR:
csat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104708556
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
104708556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Synaptobrevin
WD40
WDR55
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
104708556
NCBI-ProteinID:
XP_019084500
UniProt:
A0ABM1QCL2
LinkDB
All DBs
Position
8:complement(25340323..25350588)
Genome browser
AA seq
1096 aa
AA seq
DB search
MFVRKFLQKSSGSQDPPHPPPRGCLIAEDLDPHIVTHCGIPSTASLLAFDPIQCLLAVGT
LDGRIKVIGGDNIEAILASHKQLPFKNLEFMQNQGFLVSISNENEIQVWDLDLRQPASSL
QWESNITAFAILHGTGYMYVGDEYGMVSVLNYNVDEGKLLQLPYYVPTDALAEAAGLSSP
IDFPVVGILSQPCSRGTRLLIAFSNGLLFLWDASEDRVVLVRGNKDLPVEGKTVGDSLEA
SHDEFSDLELDGKEISSLCWASTDGSVLAVGYVDGDILFWDFSDGQKGNPSNHVVKLQLS
SAEKRLPVIVMHWCLDVSRKSSGGKLFIYGGDIIGSDEVLTMLGLDWSSGMGGLKCVGRA
DLTLSGSFADMVLSPIASSRQSGMFLFLLTNPGQLQAYDDTSLASLMSQKENKISVPPLP
YPMTVPTMDPHMTVATFSALNVNDKTSLALSEIVLAEKARTPRTPSGENAQWPLTGGVPS
HLDDYKLERLYMAGYQDGSVRIWDATYPCLSLMYVLEPKANVIEITGVNASVTAFGFCSK
TSCLAVGNECGMVRLFNLVGHKSGGTLEVVSNTDKKAHHLHQEDGPQWLAAFSFLDSPVC
SLEFLQSTTRLAVGFKCGKVAMLDIGVPSVMFVTNSLSDSGSPIKSLYVKSSSAPTDSKS
DPTNQNSINSEEDLILCAMTKDGQTILLDGNTGKIVASCLRPQKNPTAICMHIIEDCYEN
SETPSAKPAGKISGKEKNGNRSHIIDASESHSPVGEQNPVTETKFVDQRFANSLFLICYE
DALRLYSLKSLSQGSLESNMEVSLPRPCCWMGILKKDGRECAVLLLYRTGHIEIRSFPKL
EVVGESSLLSLLRWNFKPNMEKTVCSDDFGHVVLVNGCEIAILSFLANANGFRLPGSLPL
LHDKVLAAAADATFSHISAHKKNHDGAPKFLSNIIKGFRSSSEQKVDQVQDLSHLGNIFS
NPPYLKPSDTGGDDEKIIELNIDDIEIDEPVIILPLTEKDKKEKKDKRTDKEKLFDGASS
NAQPKTRTVDEIKSKYRKAGETSAIASQAKDKLLERGEKLERISQRTAELQDGAENFASM
AHELAKQMEKRKWWNI
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcagaaaatttctgcagaaatcctccggcagtcaggatcctcctcatcctcct
cctcggggatgtttgatagcagaagacctggatccccatattgtcacccactgtgggata
ccttcgacggcatctcttcttgcctttgaccctattcaatgtctcttggctgtgggaaca
ttggatggaaggataaaagtgattggtggcgataacatcgaggcgatccttgcatctcat
aagcagttacctttcaaaaacttagagttcatgcagaaccaaggctttcttgtcagcatc
tcaaacgaaaacgagattcaggtgtgggacttggatcttaggcaaccagcatcaagctta
cagtgggagtcaaacattactgcgtttgcaatccttcatggcactggctacatgtatgtt
ggtgatgagtacggtatggtgtctgttctaaactacaatgttgacgaagggaaattactg
cagcttccttattatgttccaactgatgctttagctgaagcagcggggctgtcgtctcct
attgattttccggttgttggaattctttctcagccttgttcaaggggaactagattgttg
atcgcattttcaaatggattgctttttctttgggatgcatcagaagatcgtgttgtgtta
gtacgaggaaacaaagatctacctgtggagggtaaaacagtcggtgattctcttgaagcc
tcacatgatgagttttctgatcttgaacttgatggaaaagagataagttctttgtgttgg
gcatcaacggatggttcggttctcgctgttggctatgtggatggggatatattattttgg
gacttttctgatgggcaaaaggggaacccatctaatcacgttgttaagttacagttgtct
tcggctgagaaaagacttcctgtcattgttatgcattggtgtttggatgtatctcgcaag
agtagtggtggaaaactcttcatctatggtggtgatatcattggatctgacgaagtactt
acgatgttaggtcttgattggtcttctggtatgggaggtctgaaatgtgttggccgtgct
gacctgacccttagcggttcatttgctgatatggtcttgtctccaattgccagttcaagg
caaagtgggatgtttttatttctattgacgaatcctggacaattgcaagcatatgatgat
acctctctggcttctctgatgtctcagaaagagaataagatttccgtacctccgctgcca
tatcctatgacggtaccaacgatggatccacatatgacagtggcaacattttctgcatta
aatgtgaatgataaaacgtcactagccctttctgagatagtcttagctgaaaaagctcga
acaccacgtactccatccggagaaaatgcacaatggcctctgacaggtggtgttccaagc
caccttgatgattacaagcttgaaagactgtacatggcaggttatcaagatgggtctgtg
cgaatatgggatgcaacctatccatgcctgtctcttatgtatgtactggagccaaaggca
aatgttattgaaataactggagtaaatgcatccgtaacggcttttggcttctgctctaag
acttcttgtttggctgttggtaacgaatgtggtatggttcgcctattcaacctggtcggc
cataaaagtggaggaactttggaagttgtttccaacactgacaagaaagctcaccatttg
catcaagaagatggtcctcaatggttggctgcattttccttcctggattccccagtgtgc
tccctggaatttctacagtctacaacaaggcttgccgtgggatttaaatgtggcaaggtt
gcaatgctcgatattggtgtcccgtcagtaatgttcgttacaaatagcttatctgactca
ggttccccgatcaagtcactctatgtgaaatcttcttcagctcccactgactcaaaaagt
gatccaactaatcagaattccataaattctgaagaagatttaatcttgtgcgcaatgacc
aaggatggacagaccattcttttggatggcaatactgggaaaatagtcgcctcatgcttg
agacctcaaaagaacccaactgcgatttgtatgcacattatagaggattgctatgagaac
tctgaaacgcccagtgcaaaaccagctggaaaaatctctgggaaggagaaaaatggaaac
agatctcatataatcgatgctagtgagagtcattcaccagttggtgaacagaatcctgtc
acagaaacaaaatttgttgatcagagatttgcgaactcgttatttctcatatgttatgag
gatgctctccgcttgtattctttaaagtcgttgtctcagggaagtcttgagagcaatatg
gaggtaagtcttccaaggccgtgttgctggatgggaatcctaaaaaaagatggaagggaa
tgtgcagtactcctgctttacagaacagggcatattgaaataagatctttcccgaagctt
gaagttgtgggagaaagctctttgctctcacttcttaggtggaactttaagcctaacatg
gagaagacagtatgttcggatgatttcggccatgtcgtcctggtaaatggttgtgaaatc
gccatcctttcgtttttggccaacgcaaacggcttcaggctcccagggtctttacctttg
cttcatgacaaagtccttgcagcagctgctgacgctacctttagccatatctctgctcat
aaaaaaaatcatgatggcgctcccaaattcctaagtaacattatcaaaggcttcagatca
agcagtgaacagaaggtggaccaagtacaagatttatcccacttggggaacatcttttct
aatccaccgtacttaaagccttctgataccggtggcgacgacgaaaagattatcgagcta
aacatagatgacatcgagatagatgaacctgtgatcatcttgcctttgacagagaaagac
aaaaaagaaaagaaagataagagaacggataaggaaaaactgttcgacggtgcatccagc
aatgcacaacccaaaacgagaactgtggatgaaattaagtccaaatacagaaaagcaggg
gaaacctcggcaatagcgtcacaagcaaaggacaaacttcttgagcgtggagaaaaactc
gagagaataagccaacgcacagctgagcttcaagacggggctgagaactttgcatctatg
gcacatgaacttgctaaacaaatggagaagcgaaaatggtggaacatatga
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