Camelina sativa (false flax): 104708856
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Entry
104708856 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104708856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104708856
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104708856
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
HECT type E3
104708856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
104708856
NCBI-ProteinID:
XP_010423798
LinkDB
All DBs
Position
8:complement(26783287..26803733)
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AA seq
1518 aa
AA seq
DB search
MENRGQKRMEVVEELPADKRACNSQDFRPSTSGSSVQAQDNGATSPGHDQVDADMDTSSS
ASPSSRSDEEEQDKESDEEEQDKEDSDYGSCDSDEEEDSRHRVLEEYQRGRSSDDQGKLK
SLLSTLSGETDPSGQLSGLTELCEVLSFCTEESLSDTMADKLSPVLVNLAKHENNADIML
LAIRAITYLCDVYPPSVALLVRHETIPALCQRLLTIEYLDVAEQCLQALEKISRDQPVAC
LNAGAIMAVLSFIDFFSTSIQRVAISTVVNICRKLPSESPSPFMDAVPILCNILQYEDRQ
LVENVAICLTKIADQVSESPAMLDQLCRHGLIHQSTHLLNLNSRTTLSQPVYNGVIGLLR
KLSSGSTLAFRTLYELNIGYRLKEIMSTYDISHSVSSTHVINACSSNQVHEVLKLVIELL
PASSVEDNQLALEKESFLVNQPDLLQQFGTDMVPVMIQVLNSGATVYVSYGCLSAIHKLT
CLSKSGDLVKLLKNANISSVLAGILSRKDHHVVVVALQLAEVLLEKYSDTFLNSFIKEGV
FFAIEALLNSDRAQQNPVSGFIQGSSDLSQKPATKEIVKCLCQSFGKSLSSSLQTCKIDT
DTVNILATRIKESFFGPEVFNSEKGLTDVLQDLKVLSEALSALMTVPIDAHVLHDEKFFS
IWNQIRERLNGRESVSTFEFTESGVVKSLADYLSNGLYQRKLSKGDPECDTLPFVGKRFE
VFTRLLWSDGEATPSVLIEKLQNSLSSLENFPIVLSQFLKQRNSFAAIPNGRCTTYPCLR
VRFQKAEGETTLRDYSQDFVTVDPLCYFDAVNQYMWPKVNLEPVESVEAKDQAIECQSSQ
LQSTSISCQGESSSPMEIDSAPSDAPQFQGSQVEDQMQLPVLSSGSEQQKASSSEKEDAL
PRLLFRLEGLELDRSLTVYQAILLHKLKSESETTNGSKLSGPHYITYERAAQLGDSSKNL
VPPESIEDDEYRSFLSYLFYHRLALRLKGSSPPAYDILFLLKSLEGMNRYLFHLISLGRI
TAFGEGRLENLDDLMVLVRPVAHSEFVSSKLTEKLEQQLRDSFAVSTCGLPPWFNDLMDS
CPFLFSFEVKSKYFRLAAFGSQKIHHHPQHLSNSNGEGRPVTGSLPRKKFLACREKILES
AAKMMELYGNQKVVIEVEYSEEVGTGLGPTLEFYTLVSRAFQNPELGMWRSDCSSLVGKP
SEHSGVLASPSGLFPRPWSGTSAASSDVLQKFVLLGTVVAKALQDGRVLDLPFSKAFYKL
ILGQELSSFDIHFVDPALCKTLVELQALARRRKVFAEAQGNSRAAKCDLSFHGTKIEDLC
LEFALPGYTDYDLAPHSDNDMVNLDNLEEYIKAIVNATVYSGIQKQVEAFRSGFNQVFPI
EHLRIFDEEELETMLCGERDLFNMNEVLDHIKFDHGYTSSSPPVENLLEILHEFDKEQQR
AFLQFVTGSPRLPHGGLASLNPKLTIVRKHGSDSSETDLPSVMTCANYLKLPPYSSKEKM
KEKLMYAITEGQGSFHLS
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagaggccagaaacgaatggaggttgtggaagagttacctgctgataagaga
gcttgtaactcacaggatttcaggccaagcacatctggatcatctgttcaggctcaagat
aacggtgccaccagtccaggacatgatcaggttgacgccgatatggatacttcttcatct
gcttccccttcgagtcgatcagatgaagaagaacaagataaggaatcagatgaagaagaa
caagataaggaggattctgactatggatcctgcgattctgatgaggaagaagattccaga
catagggtgcttgaggagtatcagagagggagatcatctgatgatcaagggaaattgaag
tctcttttgtccactttgagtggagaaaccgatccttcagggcagttatccgggcttact
gagttatgcgaagttttgtcattttgtactgaagagtccctgtccgacacaatggccgac
aagctctcaccggtgcttgtaaatttagctaagcatgagaacaatgctgatattatgctg
ctcgccattagagctattacttacttgtgtgatgtttatccgccttcagtagcactactt
gtaagacatgagactattcctgctctctgtcaaagactgttgactatcgagtacttggac
gttgctgagcagtgtttgcaagcgcttgagaaaatatcccgagatcagccagtagcctgc
ttgaatgctggagcaattatggcagtgctttcttttatcgatttcttctcaacaagtata
cagagagtcgcaatttctactgtggtcaatatatgtaggaagcttccatctgagtctccc
tcgcctttcatggatgctgttcctatattatgtaatattcttcaatacgaagatcgacag
ttggttgagaatgtggctatttgcttgacaaaaatagcagatcaagttagtgagtcacct
gcaatgttggatcaactgtgtcgtcatggactaattcatcaatcaacacatctcttaaac
ttgaatagccgcactaccctgtctcaacctgtttacaatggtgtgattggattgctgaga
aaactttcttctggttcaactttagctttcagaacgttatacgaacttaacattggctac
agattaaaagaaatcatgtcaacgtatgacatttctcattcagtgtcttctacacatgtt
atcaatgcatgctcctccaatcaggtgcatgaagtcttgaagttggtaattgagcttctt
ccagcttcatccgttgaggataatcagctggcattggaaaaggaaagttttcttgtcaat
cagcctgatcttttgcaacaatttggaactgacatggttcctgttatgattcaggtgcta
aactctggagctaccgtatatgtttcttatggttgcctatcagcaattcacaagctgact
tgcttgagtaagtcaggcgatcttgtcaagttgcttaagaacgccaacatttcaagtgtt
ttggctggtatcttgtcgaggaaggatcatcatgtggttgtagtagcattgcagctggca
gaagtgcttcttgagaaatacagtgatacttttttgaattcctttattaaggaaggtgtt
tttttcgctattgaagcacttttaaattctgatagagcgcaacaaaatccggtatctggt
ttcattcagggatcatctgacctttcacaaaagcctgctacgaaagagattgtgaaatgc
ttgtgccaatcctttggaaaatcactatcctcttctttacaaacatgtaagattgacact
gatactgtcaacattcttgcaacacgtatcaaggagagtttctttggacctgaggtattc
aactctgagaaaggcttgacagatgtccttcaagacctcaaggtattgtcggaagcactt
agcgctttgatgactgtacccattgatgcacatgtcctgcatgatgagaaattcttctca
atatggaaccaaatcagggaaaggctgaatggaagggaatctgtgtccacttttgaattt
acagagagtggagttgtaaagtcactggctgattatctctctaatggactctatcaacgg
aaacttagcaaaggggatcctgaatgtgatactttaccgtttgttggtaagagatttgag
gtgttcacaagattactttggtctgatggtgaggcaactccatccgtgttaatagagaag
ctccaaaattccttatcttctctggaaaacttcccaatcgtcttaagtcaattcttgaag
caaaggaactcatttgcagctattccgaatgggcgttgcacaacttatccatgcctaaga
gttcgttttcagaaagcagagggggagacgactttgcgtgattactcccaagactttgtt
actgttgacccactgtgctatttcgatgctgtcaatcaatacatgtggcctaaagtgaat
ttagaaccagtagagtctgtggaagcaaaagatcaagctatagaatgccaatcttctcag
ttgcagtcaacttcaatatcttgtcaaggtgaaagctcaagtcctatggagattgacagt
gcaccttctgatgcacctcagtttcagggatctcaagtggaagatcagatgcagcttcca
gtgctgtctagtggttcagaacaacaaaaagcttcctcctctgaaaaggaggatgcgctg
cctagacttttgtttcgtctcgaagggcttgaactagaccgctctttgactgtataccag
gctattctcttgcacaaacttaaatcagaaagtgaaactaccaacggttcaaagcttagt
ggaccccactacatcacttatgaaagggctgcacaacttggggattctagtaaaaatctg
gttccacccgaatctatagaagacgacgagtatcgctcgttcttatcctacttgttttac
catagactagctttgcgcctcaaggggtcaagtcctcctgcctatgacatattgttcctg
cttaagagtctggagggcatgaacagatatctttttcacctgatttctcttgggaggatt
actgcttttggcgaaggtaggctggagaatttggatgatctgatggtgctagttcgtcct
gtggcacattctgaatttgttagcagtaagcttacagagaagttagagcagcagcttcgt
gattcttttgctgtgtcaacttgcggtctgccaccatggtttaatgatctaatggattca
tgtccatttctgtttagttttgaagtcaaatcaaaatacttccgacttgcagcctttggt
tcacagaaaatccaccatcacccacagcaccttagcaattcaaatggtgaagggcgccca
gtaactggcagtttaccgcgtaaaaagttcttagcttgccgtgaaaaaattctagagtct
gctgcaaaaatgatggagttatacggcaaccagaaggtggtcattgaggttgaatacagt
gaagaagtcggaactggtcttgggccaacgctggagttctatacgctagtcagtagggca
tttcaaaatccggaacttggtatgtggaggagtgattgtagttccttggttggaaagcca
agcgaacactcaggggttttggcctctccttcaggactctttccacgcccttggtcaggt
acatcagctgcttcttcagatgtgctgcagaaatttgttctactggggacagtggtagca
aaggctctacaagatggacgagtcttagaccttcctttttccaaagccttctataaacta
atcctcggacaggagttgagttcatttgacatccactttgttgaccctgcactttgtaaa
acactggtggaattgcaagctctggcccgtaggagaaaggttttcgcagaagcacagggt
aattctcgagcagccaagtgtgatttaagtttccatggaacaaaaattgaggacctttgt
cttgaatttgcgttgcctggctacacggactatgatctcgctccccattctgataatgat
atggtaaatttggataacctcgaggaatatatcaaggctattgtcaatgccacagtatat
agtgggatccaaaaacaggttgaagcatttcggtctggatttaaccaagttttccctatt
gaacatcttcggattttcgatgaagaggagctggaaacaatgttgtgtggagaacgcgat
ctttttaatatgaatgaagtcttggatcacatcaagtttgatcatggatatacttctagc
agcccaccagttgaaaatttattggagattctgcatgagtttgacaaggagcaacaacga
gcgtttctgcaattcgtaacaggatctccccggctacctcatggcggtttagcatctctc
aatcctaaactaacaattgtccgcaagcatggtagcgattcttcagagactgacctgcct
agtgtgatgacatgcgccaattatctgaagcttccaccttattcttccaaagagaagatg
aaggagaaactgatgtatgccataactgaaggtcaaggttccttccatctctcttaa
DBGET
integrated database retrieval system
