Camelina sativa (false flax): 104708895
Help
Entry
104708895 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104708895
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104708895
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104708895
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104708895
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104708895
03009 Ribosome biogenesis [BR:
csat03009
]
104708895
03110 Chaperones and folding catalysts [BR:
csat03110
]
104708895
04131 Membrane trafficking [BR:
csat04131
]
104708895
03051 Proteasome [BR:
csat03051
]
104708895
03029 Mitochondrial biogenesis [BR:
csat03029
]
104708895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104708895
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104708895
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104708895
Complex C
Prp19-CDC5 complex
104708895
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104708895
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104708895
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104708895
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104708895
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104708895
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104708895
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104708895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104708895
NCBI-ProteinID:
XP_010423853
LinkDB
All DBs
Position
8:26993625..26996249
Genome browser
AA seq
651 aa
AA seq
DB search
MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVNYKGEEKEFAA
EEISSMVLIKMREIAEAYLGVSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKSKKDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTIQDEKIGEKLPVADKKKIEDSIEQAIQWLEGNQLAEADEFED
KMKELESICNPIIAKMYQGAGGEAGGPGAAGMDDDAPPASGGAGPKIEEVD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtaaaggtgaaggtccagcaatcggtatcgatctcggtactacttactcttgc
gtcggagtatggcaacacgaccgtgttgagatcattgctaatgatcaaggaaacagaacc
actccatcttacgtagctttcaccgactccgagaggttgatcggtgatgccgctaagaac
caggtcgccatgaaccctgttaacaccgttttcgatgccaagagattgatcggtcgtcgt
ttcagtgacagctctgtccagagtgacatgaaattgtggccattcaagatccaggccgga
cccgccgacaagccaatgatctacgtcaactacaagggtgaagagaaggagttcgctgct
gaggagatctcttccatggttctcattaagatgcgtgagattgctgaggcctatcttggt
gtctctatcaagaacgccgtcgtcactgttcctgcctacttcaacgactctcagcgtcaa
gcgacaaaggatgctggagttattgccggtttgaacgttatgagaatcatcaacgagccc
acagctgcagctattgcctacggtcttgacaagaaggctaccagcgttggagagaagaac
gttcttatctttgatcttggtggtggtacttttgatgtctcccttcttaccattgaggaa
ggtatctttgaggtcaaggcaacagctggtgacacccatcttggtggagaagattttgac
aacagaatggtaaaccacttcgtccaagagttcaagaggaagagcaagaaggacatcacc
ggtaacccaagagctcttaggaggttgagaacttcatgtgagagagcgaagaggactctt
tcctccactgctcagaccaccatcgaaattgactctctctacgagggaattgacttctac
tccaccatcacccgtgctagatttgaggagctcaacatggatcttttcaggaagtgtatg
gagccagttgagaagtgtctacgtgatgctaagatggacaagagcactgttcacgatgtt
gtccttgttggtggttccacccgtatccctaaggttcagcaattgcttcaggacttcttc
aacggcaaagagctttgcaagtctatcaaccccgatgaggctgttgcctacggtgctgcc
gtccagggagctattctcagcggtgaaggtaacgagaaggtccaagatcttctgttgctc
gatgtcactcctctctcccttggtttggaaactgccggaggtgtcatgaccactttgatc
cccagaaacaccaccatcccaaccaagaaggagcaggtcttctccacctattctgacaac
cagcccggtgtgttgatccaggtgtacgaaggtgagagagccagaaccaaggacaacaac
cttctcggtaaattcgagctctccggaatcccaccggctcctcgtggtgtccctcagatc
actgtctgctttgacattgatgccaatggtatcctcaacgtatctgctgaggacaagacc
accggacagaagaacaagatcaccatcaccaacgacaagggtcgtctctccaaggatgag
atcgagaagatggttcaagaggcagagaagtacaagtctgaggacgaggaacacaagaag
aaggtcgaggccaagaatgctcttgagaactacgcttacaacatgaggaacaccatccag
gatgagaagatcggtgagaagctacccgtagccgacaagaagaagatcgaggactctatt
gagcaggcgattcagtggctcgagggtaaccagttggctgaagcagatgagttcgaagac
aagatgaaggagttggagagcatctgcaacccaatcatcgccaagatgtaccaaggagcc
ggtggtgaagccggtggtccaggtgccgctggaatggacgatgatgctcctcctgcttca
ggcggtgctggccctaagatagaggaggtcgactaa
DBGET
integrated database retrieval system
