Camelina sativa (false flax): 104708899
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Entry
104708899 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104708899
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104708899
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104708899
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104708899
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104708899
03009 Ribosome biogenesis [BR:
csat03009
]
104708899
03110 Chaperones and folding catalysts [BR:
csat03110
]
104708899
04131 Membrane trafficking [BR:
csat04131
]
104708899
03051 Proteasome [BR:
csat03051
]
104708899
03029 Mitochondrial biogenesis [BR:
csat03029
]
104708899
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104708899
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104708899
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104708899
Complex C
Prp19-CDC5 complex
104708899
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104708899
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104708899
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104708899
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104708899
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104708899
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104708899
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104708899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104708899
NCBI-ProteinID:
XP_010423858
LinkDB
All DBs
Position
8:26997508..27000095
Genome browser
AA seq
652 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDASVQSDRKLWPFTIISSGTAEKPMIVVNYKGEEKQFS
AEEISSMVLIKMREISEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINE
PTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRMVNHFVQEFKRKSKQDITGLARPLRRLRTACERAKRTLSSTAQTTIEIDSLYGGADL
FAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHEVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQELLLLDVTPLSLGLETAGGVMTTL
IQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQ
ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHK
KKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAETDEFE
DKMKELESICNPIIAKIYQGAGGEAGGPGPHAMDEDAPPAPGGAGPKIEEVD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaaggagaaggccctgcgatcggtatcgatcttggtactacctactcttgt
gttggagtttggcaacatgaccgtgttgagatcattgctaacgatcaaggtaaccgaacc
acgccgtcttatgttgctttcaccgacaccgagaggctgatcggtgatgctgccaagaac
caggtcgccatgaaccctgttaacactgtcttcgatgcaaagaggttgattggtcgtaga
ttcagtgacgcatctgtccaaagcgacaggaagttgtggcctttcactatcatctcttca
ggaaccgctgagaaaccaatgattgtagtcaactacaagggtgaagagaaacagttttcc
gctgaggagatctcttccatggttctcattaagatgcgtgagattagtgaagcttacctt
ggcaccactatcaagaacgctgtggtcaccgttcctgcttacttcaatgactctcagcgt
caagccacaaaggatgctggtgtcattgctggtttgaatgttctgcgtatcatcaacgag
cccactgctgctgccattgcctacggtcttgacaagaaggccaccagcgttggagagaag
aacgttctgatctttgatcttggtggtggtacttttgatgtctctcttcttacaattgaa
gaaggtatctttgaggtcaaggccactgctggagacactcatcttggtggtgaagatttc
gataacagaatggttaaccactttgttcaagagtttaagaggaagagcaagcaggacatc
actggcctcgcaagaccccttaggaggctgagaacagcttgcgagagagcaaagagaact
ctttcttccacggcgcaaacgaccatcgagattgactctctctatggaggagctgacctc
tttgctccaattacccgtgctagattcgaagagcttaacatggatcttttcaggaagtgt
atggagcctgttgagaagtgtctccgtgatgctaagatggacaagagctcagtccatgaa
gttgttcttgtcggtggttccacccgtatccccaaagttcaacagcttctccaagatttc
ttcaatggtaaagagctctgcaagtctatcaaccctgacgaggctgttgcatatggtgca
gccgtccagggagctattctaagcggtgaaggaaacgaaaaggttcaagaacttctcttg
cttgatgtcactcctctctccctcggtcttgaaactgctggtggtgtcatgaccactttg
attcagagaaacacaaccatcccgaccaagaaggagcaggtcttctccacttactcagac
aaccagcccggcgtgttgatccaggtgttcgaaggtgagagagccagaaccaaggacaac
aaccttctcggtaaattcgagctctctggaatacctccggcaccacgtggtgtgcctcag
atcactgtctgctttgacattgatgcaaatggtatcctcaacgtatctgctgaggacaag
actaccggacagaagaacaagatcacaatcactaatgacaagggtcgtctctccaaggat
gagatcgagaagatggttcaagaagcagagaagtacaagtctgaggacgaggagcacaag
aagaaggtcgaggccaagaatgctcttgagaactacgcttacaacatgaggaacaccatc
caggacgagaagatcggtgagaaacttcccgcagcagacaagaagaagatcgaggactcc
attgagcaggctattcagtggctcgagggtaaccagttggctgaaactgacgagtttgaa
gacaagatgaaggagttggagagcatctgcaacccaatcattgccaagatataccaagga
gctggtggtgaagccggtggtccaggtccccatgctatggacgaagatgctcctcctgct
ccaggcggtgctggccctaagatcgaggaggtcgactaa
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