Camelina sativa (false flax): 104708972
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Entry
104708972 CDS
T05044
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104708972
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104708972
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104708972
Protein phosphatases and associated proteins [BR:
csat01009
]
HAD phosphatases
Fcp/Scp phosphatases
104708972
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104708972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Hydrolase
LPP20
Motif
Other DBs
NCBI-GeneID:
104708972
NCBI-ProteinID:
XP_010423929
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All DBs
Position
8:complement(27349260..27353797)
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AA seq
769 aa
AA seq
DB search
MNRLGHKSVVYNGDLRLGELDVSSSGHEFRFPNDEIRIHHLSPPGERCLPLAILQTIASF
SVRCKLESSAPVKPPELMHLHALCFHELKTAVVLLGDEEIHLVAMPSKEKKFPCFWCFSV
PSGLYDSCLKMLNTRCLSIVFDLDETLIVANTMKSFEDRIEALKAWISREIDPVRINGMS
AELKRYMDDRMLLKQYIDNDYAFDNGVLSKAQPEEVRPTSDGLEKVFRPVIRLPEKNTVL
TRINPEIRDTSVLVKLRPAWEELRSYLTAKLRKRFEVYVCTMAERDYALEMWRLLDPEAH
LISLKELRDRIVCVKPDAKKSLLSVFNGGVCHPKMAMVIDDRIKVWEEKDQPRVHAVPAY
LPYYAPQAETALLVPILCVARNVACNVRGYFFKEFDESLMNSISLVYYEDDVKNLPPPPD
VSNYVVIEDPGFAANGNITAPPMMEGMCGGEVERRLNQAAAADHSTLPATSNAEQKPETP
KPQIAVIPNNSSTTTAAALLPSHKPSLLGAPRRDGFTFSDCGRPLMMRPGVDIRNQNFNQ
PPILAKIPMQPPSSSMHSQGGWLVDDENRPSFPGRPSGVYPSQFPHGIPGSAPVASFTHP
SHLRSEEVSTDDDLKRQNPSRQTTEGGLSQSHLVSNGREHHTDGGKNNGGQSHLFVSALQ
EIGRRCGSKVEFRTVMSTNKELQFSVEVLFTGEKIGIGMAKTKKDAHQQAAENALRSLAE
KYVAHVSPLSKETEKDPRNDENGFLWESDEVVPNEGLEEKAPKENIPEL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtttaggtcataaatctgtggtttataacggggatttgcgtttgggagaactt
gatgtctcttcttcaggtcatgaattccgattccctaacgatgagattcgaatccaccat
ctatctccccctggcgagaggtgtcttcccctcgcgattcttcagacgattgcttctttt
tccgttagatgcaagcttgagtcatctgctccggtcaaacctccagagttaatgcatctt
cacgctctctgtttccatgaattgaagactgctgtggttttgctcggagatgaggagatt
catttagtggctatgccaagtaaggagaagaagttcccgtgcttttggtgtttctcggtt
ccttcaggtctttatgattcctgtttaaagatgctcaatactcggtgtctgtcaattgtg
tttgatctcgatgaaactttgattgttgcaaacaccatgaagtcatttgaggataggatc
gaggctctcaaagcttggatttcacgagagattgatcctgtcaggattaatggaatgtct
gctgaacttaaaaggtatatggatgataggatgctgctcaagcagtatattgataatgac
tatgcctttgataacggagtcttgtcaaaggctcagcctgaggaggtccgcccaacttct
gatggtctcgagaaagtttttagacccgttattagattgccggaaaagaatactgtgctt
actaggattaatccagagatccgtgacactagtgtgcttgtaaagctgaggccagcgtgg
gaggaattacgaagctatttgacagcaaaacttaggaaacgttttgaagtttacgtttgt
accatggctgaaagggattatgctttggaaatgtggagacttcttgatccggaagctcat
ttaataagtctcaaggagcttcgagatcgtattgtatgcgttaaaccagacgccaagaaa
tcgttgttaagtgtcttcaatggtggcgtttgtcatccaaaaatggcaatggtcattgat
gaccgtattaaggtttgggaggaaaaggatcaaccacgggttcatgctgtccctgcatat
ctcccttattatgctccacaagcagagacagcccttctcgttccaattctttgcgtagca
agaaatgttgcatgcaatgtcagaggttactttttcaaggaatttgatgagagtttgatg
aatagtatatctttggtttactatgaagatgatgtaaaaaatttacctccaccaccggat
gtgagcaactatgtcgttatagaggatcctggctttgccgcaaatgggaatataacagct
cctccaatgatggaaggaatgtgtgggggtgaagtggaacgcagactaaatcaagcggct
gcagccgatcattctactcttcctgccacaagtaacgctgagcagaaacctgaaaccccc
aagccgcagatagcagttataccaaataactctagcacgacaactgcagcagcattgtta
ccttcgcataaacctagtttgcttggagctcctagacgggatggcttcactttttctgat
tgtggaagaccccttatgatgaggcctggtgtcgatataaggaaccaaaactttaatcaa
ccgcccattctggctaaaattcctatgcagccaccttcgtcttctatgcattctcagggt
ggttggttggtggatgatgagaatagaccttcttttcctggtcgaccttcaggagtttat
ccaagtcaatttcctcatggaataccaggttctgctcctgttgcttcattcacacaccct
tctcacttgaggagtgaagaggtatcaacggatgatgacctgaaaaggcaaaatccttca
cgtcaaacaacagagggtggattatcccagagtcatttggtatcaaatggtagagaacat
catacagatggtggaaagaataatggcgggcagtctcatttatttgtgagtgcgctgcaa
gagattggaagaagatgcggttcaaaggtggaatttaggactgtgatgagtaccaacaaa
gagttacagttttcggttgaggttttgttcacgggtgagaagataggcattgggatggca
aaaactaagaaagatgcacatcaacaagcggctgagaatgctcttcgaagtttggctgaa
aagtatgttgcacatgtatcacctctatctaaagaaacagagaaagatccaagaaatgat
gagaatggatttttgtgggaaagcgatgaagtcgtaccaaatgaaggacttgaagagaaa
gcacctaaagaaaacattcctgagttgtga
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