Camelina sativa (false flax): 104709122
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Entry
104709122 CDS
T05044
Name
(RefSeq) elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104709122
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
104709122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
ANAPC4_WD40
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
104709122
NCBI-ProteinID:
XP_010424086
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Position
8:complement(1893630..1899339)
Genome browser
AA seq
1292 aa
AA seq
DB search
YDIDQSRLFFASSANLVYTLQLSSFQNGRAGAKTALPVEVCSSDIEPEDFITAFDYLAEK
ESLLIGTSHGLLLVHNVESDVTELVGNIEGGVKCISPSPTGDLLGLITGLGQLLVMTYDW
VLMYERTLGEVPEGGYVREADDLSVNCGGISISWRGDGKYFATMGEVYESGCMSKKIKIW
ESDSGALQSSSETKDFTQGILEWMPSGAKIAAVYKRKSDDGSPSIAFFERNGLERSSFKI
GEPAGDAMVSCKTLKWNSASDLLAGVVSCETYDAIRVWFFSNNHWYLKQEIRYPREDGVT
FIWDPTKPLQLICWTLSGQVTVRNFMWLTAVMEDSTAFVIDNSKILVTPLSLSLMPPPMY
LFSLSFSSAVRDMAYYSRNSKNCLAVFLSDGNLSFVEFPAPNTWEDLEGKVFNVEISDCK
TALGSFVHLLWLDVHSLLCVSAYGSSHNKCLSSGAFETELHGFYLQELEVVCYEDHVPDQ
VTCSGFKARVTFQTLLESPVMALAWNPSKRDSAFLEFEGGKVLGYASRSGIMETRTSDDS
VCFSSTCPWVRVAQVDAGGVHKPLICGLDDMGRLYINGKSLCNNCSSFSLYSELANEVVT
HLIILTKQDFLFIVDTKDVLQGDLALGNVYFVIDGRRRDEENMSYVNIWERGAKVVGVLN
GDEAAVVLQTMRGNLECIYPRKLVLSSITNVLAQQRFKDALNLVRRHRIDFNVIVDLYGW
QAFLQSAVEFVEQVNNLSHVTEFVCAMKNEDVTETLYKNFSFSKKGDKIFQVKDGSSNKV
SSVLQAIRKALEERIPESPSRELCILTTLARSDPPAIEESLLRIKSVREMELLNSSDAIR
KKSCPSAEEALKHLLWLLDSEAVFEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELEKM
PESLMHFNIDIKLKRFDSALRSIVSAGDGYFSDCMNLIKKNPQLFPLGLQLITDPEKKQA
VLEAWADHLIDEKRFEDAATTYLCCSKLEKASKAYRECGDWSGVLRVGALMKLSKDEILK
LAYELCEEVNALGKPAEAAKIALEYCKDISGGISLLINAREWEEALRVAFLHTADGITSV
KSSALECASGLLSEFRESIEKVGKYLTRYLAVRQRRLLLAAKLKSEERSVVDLDEDTASE
ASSNLSGMSAYTLGTRRGSAASVSSSTATSRARDLRRQRKSGKIRAGSAGEEMALVDHLK
GMRMTDGGKRELKSLLICLVTLGETESAQKLQQTAENFQVSQVAAVELANDTMSSESVDE
EVYSFERYAQKTRSTARDSDTFSWMLKVFVSP
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
tatgacatcgaccaaagtcgcttatttttcgcatcttctgctaatttagtttacaccctt
cagctctcttcctttcaaaatgggagagctggagcaaaaaccgctttacctgtggaggtc
tgcagtagcgatatagagcctgaggatttcatcacggcctttgattatctcgctgagaag
gagtctctgttaattgggacttctcatgggcttcttctggttcataatgtggagagcgat
gtgactgagctagttggaaatattgaaggaggtgtcaagtgtatctcgcctagtcctact
ggagatctacttggattgattactggtcttggacagttgcttgtaatgacttatgattgg
gttttgatgtacgagaggacccttggagaggttcctgaaggtggttacgtacgtgaagca
gatgatttgtctgtaaattgtgggggtatttccatttcctggagaggtgatggaaaatat
tttgcgactatgggtgaggtttatgaatccggttgtatgtccaagaagattaagatatgg
gaaagtgattccggtgctttgcagtcttcttcagaaacaaaagatttcacgcaggggatt
cttgaatggatgccgagtggggcaaaaatcgcagctgtttataagaggaaatcagatgat
ggcagtccatcaattgctttcttcgagaggaatggacttgagaggagctcgtttaaaatt
ggtgaaccagcaggagatgctatggtatcatgtaaaactctgaaatggaattctgcatca
gatcttcttgcaggggttgttagttgcgaaacatatgatgccattagggtgtggttcttt
agcaacaaccactggtacctgaaacaggagattaggtatccaagggaagatggggtaacg
ttcatttgggatccaacaaagccactgcagttaatatgttggactctatcagggcaggtg
actgttcgcaactttatgtggctaacagcggttatggaagactcaacagcctttgtcata
gataactctaagatactggtgacaccactatctttgtccttgatgccacctcctatgtat
ttgttcagccttagtttttcttctgctgtcagagatatggcatattactcaaggaattct
aagaattgtttggctgtgttcttgtcagatggaaacctgtcttttgttgagtttcctgca
cctaatacttgggaagatctcgaaggcaaagtcttcaatgtggaaatttcagactgtaaa
acagcactgggctcttttgtacatcttctatggttggatgtccactcacttctgtgtgtc
tctgcttatggttctagccacaacaagtgtctctcttcgggagcatttgagacagagctt
catggtttctacttacaagaacttgaagtagtctgttatgaggaccatgttcctgatcaa
gtgacttgctctggcttcaaggctcgcgttactttccagacacttctcgaatcaccagtc
atggctcttgcctggaatcctagtaagcgtgattcagcctttttggagtttgagggtggg
aaagtgcttggatatgcgtcaaggtcaggaattatggaaactcgtactagtgatgatagt
gtatgtttttcatcgacatgtccttgggtgagggtggcgcaggttgatgctggtggagtg
cataaacccttgatatgtgggcttgatgatatgggtagactgtacatcaacgggaagagc
ctatgtaataactgtagcagtttttcactttattcagagttggccaatgaagtggttacc
catttgatcattttgaccaaacaggattttctctttattgtcgataccaaggatgtactg
cagggagatctggcacttggaaacgtgtactttgttattgatggtagaaggcgagacgag
gaaaatatgagctatgttaatatttgggaaagaggtgcaaaagtagtaggagtcctcaat
ggagatgaagctgctgtagtgctacaaactatgcggggaaatctcgaatgcatatatccc
agaaagctggtcctctcttccattacgaatgtgttagctcaacaacggttcaaagatgca
ttaaacttggtaaggcgtcacagaatcgattttaatgttatcgtggatctatatgggtgg
caggcatttctacagtcagctgtagaatttgttgaacaagtaaacaatttgagccatgtt
acagaatttgtttgtgccatgaagaacgaagatgttacagaaacactgtacaaaaacttt
tccttttccaaaaagggagacaagatttttcaagtgaaagatggttccagtaacaaagta
tcatcagttctacaagcaattaggaaggctcttgaagaacgtataccagagagtccatca
agagaactctgtattttgactactcttgcccgaagtgatccaccagctattgaagaatct
cttttgaggatcaaatctgttcgtgaaatggagttgctaaactcttctgatgctataagg
aaaaagtcttgtccatctgcagaagaagccttgaaacatcttctgtggttattagattct
gaggctgtctttgaagctgccttaggtctctatgatctgaaccttgcagctattgtggca
ctcaattcccagcgtgatccaaaagaatttctaccttatcttcaggagctggaaaaaatg
cccgaatccctgatgcatttcaacattgacattaaattgaaacgttttgatagtgctctt
aggagcattgtatcagcaggggatggctacttttctgattgcatgaacttaataaagaaa
aaccctcaacttttccctctgggcctccagctaattactgatcctgaaaagaaacaagct
gttctagaggcttgggcagatcatctcattgatgaaaaacgttttgaagatgctgccact
acgtacctatgttgcagtaaactggaaaaggcttctaaggcatatcgtgaatgtggtgat
tggagtggggtactcagagttggggcgctgatgaaattaagtaaagatgagatcttgaaa
ttggcatacgaactctgtgaagaggtcaacgctcttgggaaaccagcggaagcagcaaaa
atagctcttgaatattgcaaagacataagtggtggaattagtttgcttattaatgcgagg
gaatgggaagaggcattaagggttgcatttttgcatacagcagatggtataacctcagtg
aagagttctgctctggagtgtgctagtggtttactaagtgaattcagagaatcaatagaa
aaggtaggaaaatatttgactcgctatttagctgttcggcagagacgattattgcttgca
gcaaagctcaaatccgaggagcggtctgtagttgatcttgacgaggacacagcttcagaa
gcaagtagcaacctgagtggaatgagcgcctatactttggggacaaggagaggttctgct
gcttcggtcagctcaagcacggctactagcagagcaagagatttgaggcgccagagaaag
agtgggaaaattcgggctggcagtgcgggtgaggagatggctcttgttgatcatttgaag
ggtatgcggatgaccgatggaggaaagagagagctgaagtcgttgttgatatgtctggta
acacttggtgaaacggagtctgcacagaagttgcaacagactgcagagaattttcaggtc
tcgcaagtagcagctgtagagctagcaaacgatacaatgtccagcgagagcgtagatgaa
gaagtttatagctttgaacgttacgctcagaagacgagatccacagcacgagattctgat
acttttagctggatgcttaaggtcttcgttagcccatga
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