Camelina sativa (false flax): 104709151
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Entry
104709151 CDS
T05044
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104709151
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104709151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
PHD
PHD_2
zf-RING_15
PHD_4
Motif
Other DBs
NCBI-GeneID:
104709151
NCBI-ProteinID:
XP_019084191
LinkDB
All DBs
Position
8:complement(2878279..2890001)
Genome browser
AA seq
1815 aa
AA seq
DB search
MSNQSSSGWGSTSTSTQFGIGLANTVQSEAAPYLPLPSLPLFCGAAEPGEFKLFDEVAQR
SGYRSLDRSEILAQSSRIANMLHETDVSYLDLRNEAMALNRDSVEHSQLYDQVLRCNPGA
FEYVIPGPTCDSVFTNEEPQKITSELSVPVQIQRQTDNHLARNIQPEPVKRVLRSNHLED
HSLHHEPLTNQSPKDVSAYHDSRPETSTMNEISASKKPKGKKKRKDDSFSVQPDPSVLQE
SIVTSFCEMLEDFCGRAEVSGDDRDEAEWSSVPVDEVRVLVNELMTIRSKMLLHMVPVDI
LSRLLHTLDHQIHRAEGLSIYSEHADSDSVLLVLGALESIHASLAVMANSDMPKQLYKEE
IIERILEFSRHQMMAVMSAYDPSYRTASKPVENVAFEGDDDDDHDHDMGSASKRRRIGKI
GKVKKSAVNRISGAVNTAQQKLCTILGLLKDLLLVERLSDSCILQLLKTSITTFLVENIQ
LLQLKSISLIGGIYNSYAQHRTYVIDEISQLLWKLPSSKRALRAYLLPDEEQRQIQMVTA
LLIQLVHNSTSLPETSRQASSGNSILDIPVDVGYLTKCHEAATETCCLFWTRVLERFASF
KGQDASEIKLIIENLVIDLLTALNIPEYPSVSPILEVLCVILLHNAGLKSKDISARLMAI
DLLGTIAARLKRDAVLCSKEIFWTSLESDSETSVDQVCAKDCAVCLGKTAGSLLVCQICQ
RRFHADCLGLKELDIPSRNWHCPFCVCKRQLLVLQSYCKTDTKSTGKLESEENIENSNMI
TKTEVVQQMLLNYLVHLHAIHQPGHFRTKSKSSAKEIYKLIRGNRISRNKFMTSIVRKFD
NPTWSESVISFLKYCTETLALLPFTSPDEPLYLVYSINRVMQIRAGAVESNLKALLHKDS
TKTQHGNGTYQQHSIPGHMHMMDLNTRIQDEPMHWNSYGHPTPIDLNGAAYQNPRDQFTS
YQVHNGNADFVHLQDLVCKTFYEFWFEEPPGHHTQFASDASSIPVELEKKTKQMVGLLSR
TPNHQLLVTIIKRALALDFFPQAAKAAGINPVALASVRRRCELMCKCLLEKILQVEEMSR
EEGEVQVLPYVLVLHAFCLVDPGLCTPASDPTKFVITLQPYMKSQGDSRIGAQLLESILF
IIDSVLPLIRKLPLSVTEDLEQDLKHMIVRHSFLTVVHACVRCLCSVSKLAGKGVSIVEH
LLQFFFKRLEGQGSDNTQIAGRSLFCLGLLIRHGNTLISTSGGKIFNLSGCLNLFKRHLQ
TEDLALKVRSLQALGFILIARPEYMLEEDIGKIIESTLSDEANGRMKMQALQNMYEYLLD
AEKQLGSEKASDNTVNPIEQGGHAVPVAAGAGDTNICGGIVQLYWDKILGRCLDFDDQIR
QTALKIVEVVLRQGLVHPITCVPYLIALETDPQEANQKLAHHLLMNMHEKYPAFFESRLG
DGLQLSFIFMQSISQVTSEPNQSLQQKSSTNMSGKNDHTNGTLTQARLGVSRIYKLIRGN
RISRNKFMTSIVRKFDNPTWSESVISFLKYCTETLALLPFTSPDEPLYLVYSINRVMQIR
AGAVESNLKALLHKDSTKTQHGNGTYQQHSIPGHMHMMDLNTRIQDEPMHWNSYGHPTPI
DLNGAAYQNPRDQFTSYQVHNGNADVHNTTSSDPPELSTDDLQKIQVDCLAAIAIQLLLK
LKRYLKVTYSLIDDRCQAYSPTEPLKPGDPLSKQNIAFDLSETRTDLPTTYPDLVQRYQE
FKNAMREDTVDFTIYSASFKRKRPTPRKTSRSAKKAVAYNEDDEDDDEDDRGWHGGGGRG
ASRRLSYSTRSSNRR
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaaagcagttccggctggggttcgacttcgacttcgactcagttcgggatt
ggtttggctaatactgttcagtccgaggctgctccttacttgccgctaccgtcgttacct
ttattttgcggtgccgctgagcctggggagttcaagctcttcgatgaggttgcccaacgt
agtggttataggtcgttggatcgcagtgagattctagcgcaatccagtagaatcgcaaat
atgcttcacgagactgacgtttcttatctggatcttcgaaacgaggctatggctcttaat
cgtgattctgtggagcattctcagttatacgatcaagttctacgatgcaatcctggagca
tttgagtatgttatccccggtccgacctgcgattcagtctttaccaatgaagagcctcaa
aagataacttctgagctaagtgttcctgtccagattcaacggcagacggataatcattta
gctaggaatatacaacctgaacctgtgaaaagggtattgcgatcaaatcatcttgaagat
catagtttgcaccacgaacctttgacaaaccagtcaccgaaagatgtttctgcgtatcat
gactctcggcctgaaacgagtaccatgaatgaaatttctgcttccaagaagccaaaggga
aagaagaaacgtaaagatgactcgttttcagttcaaccagatccatctgtgctgcaagag
tccattgtaacaagcttttgtgagatgttggaagacttctgtggcagagctgaagtctct
ggtgatgatagggatgaagcagagtggtcatcagtgcctgttgatgaagtccgtgttctt
gtaaatgaattgatgactatacggtcgaaaatgcttctgcatatggtacctgttgatatt
ctatcgaggttattgcacactctggatcatcagatacacagggcagaaggcttgtccatt
tatagtgaacatgcagattcagattcagtgttattggttcttggtgcccttgagtcaatc
catgcatcacttgcagtgatggccaacagtgatatgccaaagcagctctacaaggaggag
ataattgagagaattctggagttttctaggcaccaaatgatggctgttatgtctgcttat
gatccatcataccgtactgcaagtaaaccggtagaaaatgttgcatttgaaggtgatgat
gatgatgatcacgatcatgacatgggctcagccagcaaaaggcggcgcataggaaagatc
ggcaaagtgaagaagtcggcagtgaacaggatctctggagcagtgaatactgcacaacag
aaactttgcactattcttggcttactcaaggacctgttgttggtagaaaggttgtctgac
agttgcattttacaattgttgaagacaagtattacgacatttctggtggaaaacatccaa
cttctacaacttaaatcaattagcttaatcggtggtatatacaattcatatgctcaacac
cgaacgtatgtgatagatgaaatatctcaattactatggaagttaccttcctcgaaacga
gcattgagagcgtatcttctccctgatgaagaacagaggcagattcaaatggtcactgct
ttgcttattcagttggttcacaacagcacaagccttcctgaaacctcgagacaggcttcg
agtggaaactccatactggatatcccagttgatgttggctacctaactaaatgtcatgaa
gcggctacagaaacatgttgcctcttctggactcgtgtccttgaacgatttgccagtttt
aagggtcaggatgcttcagagatcaaattgattattgagaatcttgttatagatttactg
acagcattaaatattcctgaatatccatccgtgtctcctatccttgaggttctctgtgtc
atactgctgcataatgcagggttgaaatcaaaagatatctcggctcgattaatggccatt
gacttgctaggtacaattgctgcaaggttaaaacgtgatgctgtcctctgcagtaaagaa
attttctggacgtcactagaatctgatagtgaaactagcgtcgaccaagtttgcgcaaaa
gattgcgctgtttgtttaggtaaaacggctgggagcttattggtctgtcaaatctgtcaa
aggcggtttcatgctgactgtttgggtttaaaggaactagacattccaagtcgaaattgg
cactgtccgttttgcgtgtgcaagaggcaacttcttgtactacagtcttactgcaagacg
gacaccaagagtactggtaagttggaatcagaagaaaacatcgaaaactcaaatatgatc
acgaagactgaagttgtgcaacagatgctcttgaattacctngttcatcttcatgcaatc
catcagccaggtcacttcagaaccaaatcaaagtcttcagcaaaagagatctacaagctt
atccgtggaaaccggatttctcgtaacaaatttatgacttcgattgttcgcaagtttgat
aatccaacatggagtgaatcagtaatatcctttctgaagtattgcaccgaaacccttgcc
ttgcttccattcacatcacctgatgagccgctgtatcttgtatattccataaaccgagta
atgcaaattcgggctggtgcagtcgagtcaaatttgaaggctttgttacataaagattcc
acaaagactcagcacggaaatggaacataccaacaacattcgattccgggacatatgcac
atgatggatctaaacactagaatccaagatgaaccgatgcattggaattcctatggccat
ccaactccaattgacctcaatggagcagcataccaaaatccaagggatcagttcacttca
tatcaagtccataatgggaacgcagattttgttcatctgcaggatcttgtgtgcaaaact
ttctatgaattttggtttgaggaacctccagggcatcatactcagtttgctagtgatgct
agctccattccagtggaactggaaaagaaaaccaaacaaatggttgggttgttaagcagg
accccaaaccaccagcttcttgtgacaattattaagcgtgccttggctttggattttttc
cctcaagcagctaaagctgctggtattaacccagttgctcttgcatcagtacgcaggcgt
tgcgagttgatgtgcaagtgcttactggaaaaaatattacaggtcgaagaaatgagccgc
gaagaaggagaggtgcaagtacttccttatgtacttgttttgcatgctttttgtctggtg
gatcctggtctgtgtacaccggcctcagaccctactaagtttgtcatcaccctacagcca
tatatgaagagtcagggtgatagtcgaattggagcacaattactagagagtattcttttc
attatcgattctgtcctacccttgatccgcaagctgcctttaagtgtcacagaagatctg
gaacaagatctaaagcatatgattgttcgacattcgtttctaactgttgttcatgcatgt
gttaggtgtctctgttctgtgagtaaattggcgggaaaaggtgttagcatagtcgagcat
cttcttcagttcttttttaagcgtctggagggccaaggttccgataacacacagattgct
gggcggtccctcttttgtcttggcttacttatccgccatggaaacactcttattagcacc
tcgggtggcaagattttcaatctctctggctgtcttaatttatttaaacgacacctccaa
acagaagatcttgctttgaaagtcaggtcgttgcaggctttaggattcatcctaattgca
cgacctgagtacatgttggaagaagacattggaaaaataatcgagagtacattatcagat
gaagcaaacgggcgtatgaagatgcaagcattacaaaatatgtatgaataccttcttgat
gcggaaaaacaattgggatccgagaaagccagtgataacacagttaacccaattgagcaa
ggtggccatgcagtacccgtggccgctggtgcaggtgacaccaacatttgcggtggtatt
gtgcagttgtattgggataagatattaggtagatgcttggactttgatgatcaaattcgc
cagactgctctcaagatagtggaagttgtactacgtcaaggtctagttcatcctattacg
tgtgttccttatttgattgccctcgagacagatcctcaagaggccaaccaaaagctggcc
catcatttactaatgaatatgcatgagaagtatccggctttttttgagagccgtctcggt
gacggactccaactgtctttcatcttcatgcaatccatcagccaggtcacttcagaacca
aatcaaagtcttcagcaaaagagttcgacaaacatgtcgggaaaaaatgatcatactaat
ggtactctcacacaagctagacttggcgtctctaggatctacaagcttatccgtggaaac
cggatttctcgaaacaaatttatgacttcgattgttcgcaagtttgataatccaacctgg
agtgaatcagtaatatcatttctgaagtattgcactgaaacccttgctttgcttccattc
acatcacctgatgagccgctctatcttgtatattccataaaccgagtaatgcaaattcgg
gctggtgcagtcgagtcaaatttgaaggctttgttacataaagattccacaaagactcag
cacggaaatggaacataccaacaacattcgattccgggacatatgcacatgatggatcta
aacactagaatccaagatgaaccgatgcattggaattcctatggccatccaactccaatt
gacctcaatggagcagcataccaaaatccaagggatcagttcacttcatatcaagtccat
aatgggaacgcagatgtgcacaatacgacctcatctgatcctcctgaattgtctaccgat
gatctgcagaaaattcaggttgattgcttagcagctatagctatacaacttcttttgaag
ctcaagagatacttaaaagtcacgtacagcttaattgatgaccggtgccaagcctattct
ccaacggaaccattgaagccaggagatcctctgtccaaacaaaacattgcctttgatctc
agtgaaactcgcaccgacttacctacaacatatccagacttagttcagagatatcaggag
tttaagaacgcaatgagagaagacacagttgacttcaccatctattcagcaagctttaag
agaaaacgcccaacgccaagaaaaacttcaagatctgctaaaaaagcagtggcctacaat
gaagatgatgaagatgacgacgaagatgacagaggatggcatggaggaggtggaagagga
gcttctcggagactgagttacagcaccagaagtagcaacagaagataa
DBGET
integrated database retrieval system