Camelina sativa (false flax): 104709181
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Entry
104709181 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104709181
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104709181
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
104709181
NCBI-ProteinID:
XP_010424136
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Position
8:complement(3754052..3755869)
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AA seq
426 aa
AA seq
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MKSLLFLVLLCLFRINKLGICLEEEARKANNGVGRPGFTSVTSFGAIGDGKTDDTKAFLK
AWEAVCKGGSRGNTKILVPQWKTFMLKPLAFVGPCTSSSISFMIKGNLVAPSYTWYAGRY
PTWINFDSINGLVVTGGGTIDGRGSLWWGNVNKRPSAMNFNNCNGLRISNLRHLNSPRSH
VGLSCSKNIEVSGLRMTAPGDSPNTDGIDISNCKKVNIHGSVIATGDDCIAINSGSSDIN
ITGIFCGPGHGISVGSLGLNGDFATVEEVRVKNCTFTNTQNGVRIKTYQNGSGYARKISF
MDINMVASENPIIIDQSYHNGRTNRGKGKSSNKYQNCHFAKPKSQTGNGKGVKVSDVRYT
RIHGSSASDQAITLNCDADLGCVGIVMDNVNMNSSTTGHKVFASCKNADGSFYDSKVTCL
KKYYHL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctttgttgttcttagtcttgttatgtttgtttcgaataaacaaattaggtatt
tgcttagaagaagaagctcgaaaggctaacaacggagttggaaggcctggattcacaagt
gtcactagtttcggagctattggcgatggaaagaccgatgatactaaggcttttcttaag
gcatgggaagctgtatgtaaaggaggaagtagaggtaatacaaagattctagtgcctcaa
tggaaaacattcatgcttaagcctcttgcattcgtcggtccatgcacctcttcctctatc
tcctttatgataaaaggtaatcttgtggcaccgagttacacttggtatgcgggaagatac
ccaacatggattaattttgacagtatcaacggcctagttgtcaccggaggtggcaccata
gatggtcgtggttctttgtggtggggtaacgttaataaacgcccctccgcaatgaacttc
aacaactgtaatggtcttaggatttctaatctccggcacttgaacagccctcggagtcat
gtaggactaagttgttcaaagaacatcgaggtctcgggtctaaggatgactgcacccggc
gatagtcccaacaccgatggtattgacatatcaaactgtaaaaaagtcaacatacacggc
tcagtgattgccactggagatgattgcattgccattaatagtggttcctctgatatcaac
ataaccggcattttctgtggccctggtcatggcatcagtgtaggaagccttggactaaat
ggagattttgcaaccgttgaagaagttagggtaaagaactgcacttttacaaacactcag
aacggtgtccgaatcaagacataccagaacggatcaggatatgctaggaaaatctcgttc
atggatattaacatggttgcatccgaaaaccctattatcatcgaccagagctatcacaat
gggcgcacaaatagaggaaagggcaagtcatctaataaatatcaaaattgtcattttgca
aaaccaaaatctcagaccggtaatggcaaaggagtgaaagtgagcgatgtgcgttacact
agaatacacgggtcatcagcgagcgatcaagctatcacattgaactgcgatgcagacttg
ggatgtgttggaattgtgatggacaatgtgaatatgaactcatcgacaacaggtcacaag
gtgtttgcttcatgcaaaaatgctgatgggtctttttatgattcgaaagtgacttgtctt
aaaaagtactaccatctatga
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