Camelina sativa (false flax): 104709846
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Entry
104709846 CDS
T05044
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104709846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104709846
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104709846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
MMR_HSR1
GTP_EFTU_D3
Zn_ribbon_RanBP
PHD
Motif
Other DBs
NCBI-GeneID:
104709846
NCBI-ProteinID:
XP_019084368
LinkDB
All DBs
Position
8:complement(23041456..23045400)
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AA seq
621 aa
AA seq
DB search
MPRKGLSNFDDYDDGFDDDDDAYDYDYDIDIDGPEEEEEEEEVVVPKEEIAKAGLWRCAI
CTYDNDESMFVCDICGVLRHPVAGNQSINKNIVEGRCKEPVVSKLAKSLFGSVPSNTSKR
AVLCLLDNKNLVKEQGPLPGISRGNIHDLHKAFSSKTSCVSIAPFKFDAPSPDDLVTNGL
TSTKSGPKGSGDASMRQKEKQDSAENNPLKKGGDSSETSSRGRHDKLDNSFSKGGARGIK
SGKSLPKEKTDMSNETSSSSKYMESSERLTGTMNKMSLTGETEKSSDIMTIRPKSKSKHK
PEEWMLLDKEPDALSQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGK
GSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADA
AILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAVNKMDIVGYSKERFDLIKQ
HVGSFLQTCRFKDSSLTWIPLSAMENQNLVAAPSDNRLSSWYNGPCLLDAVDSVKSPDRD
VSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRSGSKIMVSLQNPVCVETFSESRALGRV
FLRSSGRTVAMGKVTRIIQDS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaaggattatccaatttcgatgattatgatgatggttttgatgatgatgac
gatgcttatgattatgactacgatattgatatagatggacctgaagaagaagaagaagaa
gaagaagttgttgtaccaaaggaagaaattgctaaggcagggctttggcgatgtgcaatc
tgtacatatgataatgatgagagtatgtttgtgtgtgatatttgcggtgttcttcgccat
cctgtggccggaaatcaaagtatcaataagaatatagttgaaggcagatgcaaagaacct
gtggtatccaaattggcaaagtcccttttcggatcagtcccatctaatacatcgaaaagg
gctgttctttgtctgcttgataacaagaatcttgtgaaggaacagggacctctgcctgga
atttcccgtgggaatattcatgatctccacaaggcttttagttctaaaacatcctgcgtt
agtatagcacctttcaagtttgatgctccatcgccagatgatttagtcaccaatggactg
acatccacgaaaagtggtccgaaaggctcaggtgatgctagcatgaggcagaaggagaag
caagatagcgcagaaaataatcctttaaagaaaggaggcgatagttcagaaacaagctcc
cgaggtagacatgataaacttgataatagtttttcgaagggaggtgcgcgcggcataaaa
tcaggcaaaagtttgccaaaagaaaaaacagatatgtctaatgagacaagttcttcctcc
aaatatatggagtcgtcggagaggcttactggtactatgaacaagatgtctttgactggg
gaaacagaaaaatccagcgatattatgactataagaccaaaatcaaaatctaagcataag
ccagaggagtggatgcttcttgacaaagaaccagatgctcttagccaacttaatcttgcc
attgtggggcacgttgattctggtaagtcaacactctcgggtagattattgcatctgttg
ggaagaatatctcagaagcaaatgcacaagtatgagaaagaagcaaagttgcagggcaaa
gggtcttttgcatatgcctgggcattggatgagagtgctgaagagagggagcgaggaata
actatgactgtggctgttgcttattttaattccaaaagacatcatgttgttttgctcgac
tctcctggacacaaagattttgttccaaacatgatagcaggagcaacacaagcagatgcc
gcgattcttgtcatagatgcatctgtcggtgcttttgaagctggttttgataatctgaaa
ggccagacaagggagcatgcacgtgttctgagaggttttggcgtggagcaagtcatagtt
gcagtcaacaaaatggatattgttgggtattcaaaggaaagatttgatttgattaagcag
catgttggatcctttttgcaaacctgtcgttttaaggattcgtctctgacatggattcct
ttaagtgccatggaaaatcaaaatttggtggcagctccctctgacaaccgcttatcctca
tggtataatggtccatgtttattggatgccgttgactctgtcaagtctcctgatagagac
gtctcaaagcctctgctcatgcctatatgtgacgctgtaaggtcaacttcacaagggcag
gtatctgcatgtggcaaacttgaagcgggagctgttcggtcaggatccaagataatggtt
agtctccaaaatccagtttgtgtggagacattttccgaaagtagagctcttggaagagtg
ttccttagatcatcgggaagaactgtcgctatgggaaaagttactcgaattatccaagac
tcataa
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