Camelina sativa (false flax): 104710001
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Entry
104710001 CDS
T05044
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104710001
03460 Fanconi anemia pathway
104710001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104710001
03036 Chromosome and associated proteins [BR:
csat03036
]
104710001
03400 DNA repair and recombination proteins [BR:
csat03400
]
104710001
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104710001
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104710001
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104710001
FA (Fanconi anemia) pathway
Downstream FA components
104710001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
104710001
NCBI-ProteinID:
XP_019084409
LinkDB
All DBs
Position
8:complement(27533076..27540247)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSTWQLFPDSSGDGFRWEVAGRILQSDSDDSTPNQALDSSAPLPSMPDLLLQGCSKLIER
EESMGMPCEIPMFRTGLGKSVPLKESSIARAKSLLADDNVASSYSDLQNTYSSNPQMRAV
DTPGTLPMFTTALGKSVPLKESSIAKALSILGGDKMNDSVDCAANVLPRESGFGAPNSFF
QTASNKKVNVSSAGLARAKALLGLDEDDLNEFTHVNQSSSSHHQHEWSGLKTHEEFDALA
VHDHSRTPGKFEDHVSGKMSEILNPSLKVAPTKFQTADGKSLSVSAEALNRARNLLGDPE
LGAFFDDVAAAGDQFVTPQKDEKLGDIAINSGSANTVYTAHEEKTSNKHTSNSFVSPLRS
SSKQFRSVKLENLPLGGNLIKKFDAAVDEADCALNITKLATHGLSNNRPLSSDMAVNNSK
ENGFNRRAKQFGRPADQPLVDITNRGIAYANNKQDSTQKKRLGKTVSVSPFKRPRISSFK
TPLKKNDLHASSGLSVVSSDTLSSKKVLSTRYPERFPRVYIKDYFGMRPTATTKMDYVPD
HVRRIKSSNADKYVFRDESSSNMVGAETFLQMLSESGASLQHALRKWVTNHYRWIVWKLA
CYEIYYPAKCRGKFLTVTNVLEELKYRYEREVNHGHCSAIKRILSGDAPASSMVVLCISA
INPKTNNDSQETHGSDSCSNVKVELTDGWYSINAALDVVLTKQLNAGKLFVGQKLRILGA
GLSGWATPTSPLEAVTSSTICLLLNINGTYRAHWADRLGFCKEIGVPLAFNCIKCNGGPV
PKTLAGITRIYPILYKEKLGEKKSIVRSERMESKIIQLHNQRQIXEGAKVYKLLETAAEP
EILMAEMSPEQLTSFTTYKAKYEAAKQMKMEKSVAKALEDAGLGERNVTPFMRIRLVGLT
SLSYEGEHNPKEGIVTIWNPTEKQRTELTEGKIYIMKGLVPMNSDSETLYLHARGSSSRW
QPLSPKASESFQPFFNPRKPISLSNLGEIPFSSEFDIAAYVVYVGDAYTDVQQKKQWVFV
TDGSTQHSGEISNSLLAISFSTPAMDDISVPHISQNLVGSVVGFCNLIKRAKDAKNEMWV
GEATENSVYFINAEAAYSSHLRTSSAHIQKWAMLSSSNSVIHELRQRVLFIIGACKSPSC
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagttatttcccgattccagcggcgatggtttccggtgggaagtcgct
ggccggattcttcagtccgactccgatgattctactccaaatcaggcgctcgactcctca
gctcccctaccttccatgcccgatctcttgcttcaaggatgctcgaagcttatagaacgg
gaagaatccatgggcatgccttgcgaaatcccaatgttcaggactgggctggggaagtct
gtacctctaaaagagtcttcgattgctagagccaaatcccttttagcagatgacaatgtt
gcctcctcctattcagatttgcagaacacttatagttcaaatccccaaatgcgagcagtg
gatacacctggaactttgcctatgttcacgacggctttaggcaaatctgtcccactgaaa
gaatcttcaattgccaaagctttgtccattcttgggggtgataagatgaatgactcagtt
gattgtgcagccaacgttcttcccagggagagtgggtttggtgctcccaactcatttttc
cagacagcttctaacaagaaggttaatgtatcttctgccggtttggcaagagccaaggca
ttgctaggactagacgaagatgatttgaatgaatttacgcacgtgaaccagtcgtcttct
tcccaccaccaacatgagtggtctggattaaaaacgcatgaggaatttgatgctctagcg
gttcacgatcattccagaactccaggaaaatttgaggatcatgtttcagggaagatgtct
gaaatcctaaatccatctttaaaggttgctccaacaaagtttcagactgctgatggaaaa
tcattgtcagtgtcagctgaggcattgaatcgtgccagaaatcttcttggggatcctgaa
ttaggggctttctttgatgatgtagcggcagcaggtgatcaatttgttacaccacagaaa
gatgaaaagttaggtgatattgctataaacagtggaagcgccaatacagtttatactgct
catgaagaaaaaacaagcaacaaacatacgtcaaacagttttgtatctcctcttcggtca
tcttcaaagcagtttagatcagtgaaattggagaacctacctttagggggtaatttgatc
aagaaatttgatgcggctgttgatgaggcagactgtgctctgaatatcaccaaacttgct
acacatggactatcaaataacaggcctttatcatcagatatggctgtgaacaattccaag
gaaaacggtttcaatcgaagagctaagcagtttggaaggccagccgaccagccacttgtc
gatataacaaatcgcggtatagcttatgcaaacaataaacaagacagtacccaaaagaaa
aggctgggaaagacagtctccgtttctccttttaaaaggccaaggatttcctcctttaaa
actcctttaaagaaaaatgatctgcatgcttcaagtggtttatctgtcgtatcttctgat
acacttagttccaaaaaggtgctttcgacaagatatccagaaaggtttccaagagtatat
ataaaggattattttggaatgcgtccaacagctacgaccaagatggattatgtgccagac
catgtcaggaggatcaaatcaagtaatgcagataaatatgtattccgtgatgagtcttcc
tcaaacatggttggagctgaaacttttcttcaaatgttgtctgagtctggtgcttcctta
caacatgcattgagaaagtgggtcactaatcactacaggtggatagtctggaagcttgca
tgctacgagatatactacccagcaaaatgcagaggaaaatttctgacagtcaccaatgtt
ctggaggaactaaaatacagatatgagagagaggtcaatcatggtcattgctctgcaatc
aagaggatcctgagtggtgatgctccagcttcttcaatggtggtgctatgcatatcagct
atcaatccaaagaccaacaatgattctcaggaaacacatggttctgatagttgcagcaat
gtgaaagtagaactcactgatgggtggtactcgattaatgctgctctggatgtggtgcta
acaaagcagctgaatgctggaaaattgtttgttgggcagaagcttcgaatcctcggggca
ggactttctggctgggctaccccaacatcacctcttgaggcagtaacttcaagtacaatc
tgtttgttgttgaatattaatgggacatacagagctcactgggcagaccgactaggattc
tgtaaagaaattggtgtccctctagctttcaactgtatcaagtgcaatgggggtcctgtg
cctaaaacgctagctggaatcacacgaatataccccatactatacaaggaaaaattaggt
gaaaagaagtcaatagttcgatcagagagaatggaaagcaaaattatccagctgcataat
cagaggcaaataanagaaggagccaaggtctataagctgttagagacagctgctgaacct
gaaatcctaatggcagaaatgagcccggagcagttgacatctttcactacatataaagcg
aaatacgaggcagcaaagcaaatgaagatggaaaaatcagtagcaaaagctctggaagat
gcgggcttaggtgaaagaaatgtcaccccgttcatgaggattaggcttgttggactgacg
agcttaagttatgaaggtgagcacaatccaaaagaaggcatagtaacaatctggaatcct
acagagaaacagagaaccgagctgacagagggaaaaatatacataatgaaagggctagta
ccaatgaactcagattcagaaacactttacttacatgccagagggtcaagctcaagatgg
caacctttgtctccaaaagcttctgaaagttttcagccctttttcaacccacgtaaacca
atatctttgtcaaatcttggtgaaattcctttttcaagtgaatttgatatcgctgcgtac
gttgtgtatgttggagatgcatacacggatgttcaacaaaagaagcagtgggtgtttgtg
acagatggatccacccaacattcaggggaaatctcaaacagccttcttgctataagcttc
agcaccccagccatggatgatatctcggttccccacatcagccaaaatttggttggatcc
gtggttggattctgcaatctaataaaaagagcaaaagatgcgaaaaacgaaatgtgggtt
ggtgaggcaacagagaactcagtctacttcataaacgcagaagctgcatactcgtctcac
ctcagaactagcagtgcccatatccaaaaatgggctatgctctcttcttccaactccgtc
atccatgaacttcggcaaagagtcctatttataatcggtgcttgtaaatcaccatcatgc
tga
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