Camelina sativa (false flax): 104710387
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Entry
104710387 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104710387
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104710387
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104710387
03036 Chromosome and associated proteins [BR:
csat03036
]
104710387
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104710387
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104710387
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104710387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
104710387
NCBI-ProteinID:
XP_010425266
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All DBs
Position
9:3665190..3667576
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AA seq
475 aa
AA seq
DB search
MFKQILGKLPKKPSAKFWDNGESQTADNNNNQGGGDEALSQRSSSNGDNTDCVSFDVLPR
LRDVSISEKQELFLKKLRLCCVVFDFAVEPQQNLKEKEIKRQTLLEVVDYVISSGNGKFT
ESVIQEGTKMISANLFSNPHRQWKNKTPEALDLEEEEGSLNPSWPHLQIVYEFLLRIVAS
PNTDPKISKKYIDHTFVLKLLDLFDSEDPREREYLKTILHRIYGRFMVHRPFIRKTMNNI
LYDFIFETGKHSGIAEFLEVLGSIINGFALPLKEEHKLFLTRVLIPLHKLKCLPNYHQQL
SYCVIQFVEKDCKLADTVIRGMLKYWPVTNSSKEIMFLNELEEILEATQLTEFERCMIPL
SRQIAQCLSSSHFQVAERALYLWNNDHVTNLVRQNSRIILPIVFPALEKNGSSHWNQAVK
NLTENVLKVLSDTNPDLFEECLCKFQEDQQKAEDTKKKNGETWRQLEEIVASMAK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcagatacttgggaagcttccaaagaaaccttctgctaagttttgggataat
ggtgaatcccaaactgcagataacaacaacaatcaaggaggaggtgatgaagctttgagt
cagagatcatcatcaaacggagataacactgattgtgtttcttttgatgtgttgccaagg
ttgagagatgtttcaatctctgagaagcaagaactgtttcttaagaagcttagactttgc
tgtgtagtgtttgatttcgccgtggagcctcaacagaacctcaaggagaaagagatcaaa
aggcaaacacttcttgaagttgtggattatgttatctcttcagggaatggcaagtttact
gaatcagttattcaagaaggtacaaagatgatttcggcgaatctctttagtaatcctcat
cggcagtggaagaacaaaactccagaagcattggatttggaagaagaagaaggatctctg
aatccttcttggcctcacttgcagattgtttatgagttccttctaagaatcgttgcatct
cccaacacagaccccaagatatccaagaaatacatagatcataccttcgttctcaagcta
ttggatttgtttgattctgaagatcctagggagagagagtatctgaaaactatacttcac
cggatctacgggaggtttatggttcatcgaccgttcatcaggaaaactatgaacaacatc
ttgtatgattttatattcgagactgggaagcactcaggaatcgccgagtttcttgaagtg
ttaggatccatcatcaatggatttgctttaccgctcaaggaagaacacaagctcttccta
actcgtgtcttgattcctctacacaaactgaaatgcttaccaaattaccatcaacagctt
tcttactgcgttatacagtttgttgagaaagattgtaagctcgcggatacagttattaga
gggatgttgaagtactggcctgttactaatagctctaaagaaatcatgttcttgaatgaa
ttggaggagatattagaagcaactcaattaacagagtttgaacggtgtatgattccgctc
tctcgccaaattgctcagtgtttaagcagttctcactttcaggtagcggaacgggcttta
tacttatggaataacgatcatgtcactaatttggtgagacaaaacagcagaataatttta
cctatagtgtttcctgctttggagaaaaacggtagcagccattggaatcaggctgtgaag
aacttgaccgagaatgttctcaaggttttgtccgatacaaatccagacttattcgaagaa
tgtttgtgcaagttccaagaagatcagcaaaaagcagaagatactaagaagaagaatgga
gaaacctggagacagctagaggagattgttgcatcaatggcgaagtaa
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