Camelina sativa (false flax): 104710606
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Entry
104710606 CDS
T05044
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104710606
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104710606
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR11_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
104710606
NCBI-ProteinID:
XP_010425542
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Position
9:6154958..6158322
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AA seq
515 aa
AA seq
DB search
MESSRSRSVFVDIGLRELNGFRVRKRPFFPDSELTCRELTGVSVEHDGIRTPPLAVSFCK
TSRNSQLFAVSDEDGHVSLFNSSKKFASSATHQENTEKARFRDWIAHYNAVFDISWIKGD
SCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCPHPTNSDLLVSGSRDGCFALWDL
RCKSSSYKQELCINSTDMVKGAHLSPLSKRIRRRKAASSSITSVLYLKDEITIATAGALD
SALKFWDTRKLKVPFAQASPQSDPTNTKEKGLHGIVSLSQDSSGTLLTASCKDNRINLYD
TLQLDKGPVKSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPHADPTLLKGH
DFEVTAVDWSPSEIGKVATASDDFTVRLWNIENNRCSNANSTASAPRVKRRVTALSDSEA
KEILEMNREAESPQQHSLLLSSSDDKQSMPIIGTPESKKKKTSSSSSLSSLSSSSEEDTI
CERTPETTFNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaatcctccagatctagatccgtcttcgtcgacatcggactcagagagctcaacggc
tttcgagtacggaagcgaccgttcttcccagattccgagctgacttgcagagaattaacc
ggcgtttcggtagaacacgacgggattcgaactcctccgttggctgtttcgttttgtaag
actagccggaattctcaattattcgcggtatcagatgaagatggacatgtgagcttgttt
aattccagtaagaagtttgcctcttctgcaacccaccaagagaatacagagaaagctagg
tttcgtgattggattgctcattataatgctgtgtttgatatttcttggatcaagggagat
agttgtcttctgactgcctctggtgatcaaactattaaagtgtgggatgtggaggagaat
aagtgtactggagttcttataggacacacaggaactgtgaaatcaatgtgtccacatcca
actaattctgatcttcttgtatctggttcaagagatggatgttttgcgctatgggattta
agatgtaaaagtagttcttacaaacaggaactttgtatcaactctactgacatggttaaa
ggagctcatctatcccctctttcaaaacgaatcagacgtcgcaaggctgcttcatcaagt
attacctctgtgctttatctcaaggacgagatcacaattgccactgctggagcacttgat
agtgccttgaaattttgggatacaaggaagctgaaagttccttttgctcaagcatctcca
cagtcagacccaacaaacactaaggaaaaaggattacatggtatagtatccttgtctcag
gactcaagtggaacccttctcacagcatcatgcaaggacaatagaatcaatttatacgac
acgctgcagcttgacaaaggacctgtaaaatccttctctggctgccgaattgattctttt
ttcgtaaggacaatgattagtcctgatggtgaatatgttttgagcggttcaagcgatgga
aacgcttacatatggcaggtcaataagcctcacgcagatcctacactcttaaaaggccac
gactttgaagttactgcagtagattggtctccatcagagattgggaaagttgcaacagct
tcagatgatttcacggtacgactgtggaacatagagaacaaccgctgttcgaacgcaaac
tcaacagcatctgcgcctagagtcaaacgcagagtaaccgcattgtcagatagtgaagcc
aaagagatacttgagatgaacagagaagctgagagtccgcaacagcattcactattatta
tcatcatcagatgataaacagtcaatgcctatcatcggaactccagagtctaaaaagaag
aaaacatcttcatcatcatcattgtcatcgttatcatcatcatcagaagaagatacaata
tgcgagagaacaccagaaaccacattcaacagtccatcctctgtactaaaccctccttcc
tcagtcaaaaggcgaactattagagattattttcttgtcactccctaa
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