Camelina sativa (false flax): 104710896
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Entry
104710896 CDS
T05044
Name
(RefSeq) protein transport protein Sec24-like CEF
KO
K14007
protein transport protein SEC24
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104710896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104710896
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104710896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
104710896
NCBI-ProteinID:
XP_010425852
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All DBs
Position
9:complement(12784799..12794134)
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AA seq
1103 aa
AA seq
DB search
MAAPVPPGAQRPNNPQNSGPPPNFVPGSQGNPNSLAANMQNLNLNRPPPPMPGSGPRPSP
PFGQSPPPFPQSAPSYGVQQQPRPSPMARPGPPPPAAMARPGGPLQVSQPGGFSSNFQGG
RPAAPPSNHPPFGSRPSTGPLIGGGSSFPQPGGFPASGPPGSVAAPPPTGARPFGFGSPP
PMGPGMSMPPPSGVPGGPLNNGPPPSGMPGGPLSNGPPPSGMPGGPLSNGPPPPMMGPGA
FPRGSQFPSGPMMAPPPPYGQPPIAGPFSGNSPLSSPPAHSLPPPTTFPGAPYGRPPMPG
GFPYGAPPQQIPSAPGTPGSMYGMGPMPNQSMTSVSSPSKIDINQIPRPGSSSSPIVYET
RVQNQANPPPPTTVDYITRDTGNCSPRYMRCTINQIPCTVDLLSTSGMQLALIVQPMALS
HPSEEPIQVVDFGESGPVRCSRCKGYMNPFMKFIDQGRKFICNLCGYTDETPRDYQCNLG
PDGRRRDADDRPELCRGTVDFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACGAI
QQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIVQLS
ECRQHLEILLESIPTMFQESKSPESAFGAAVKAAFLAMKSTGGKLMVFQSVLPSVGIGAL
SSREADGRANASAGEKEAHKLLQPAEKTLRTMAIEFAEYQVCVDLFITTQAYVDMASISD
IPRTTGGQVYCYYPFSALSDPPKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQDYSGNFC
KRIPTDIDLPAIDCDKAVMVTLKHDDKLQDGAECGFQCALLYTTISGERRIRVLNLSLPC
TNMLSNLFRSADLDSQFACMLKQAANDIPSKALPLVKEQATNSCITILHSYRKFCATVTS
TGQLILPEALKLLPLYTLALTKGVGLRADGRIDDRSFWINHVSSLSTPLAIPLVYPRMIA
VHDLDAKDNEENVVPSPIPLQSEHLSDEGVFFLENGEDGLVYIGESVNSDILQKLFDVRS
AADIPSQYVLQQYDNPLSKKFNEVVNEIRGQRSSYLRIKLCKKGDPAGNMLFQSYMVEDR
GSGGPSYVDFLISVHRQIQHKLN
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccagtgcctccaggagcacaaagacctaacaatcctcaaaactctggtcct
cctcctaatttcgtccctggttcacaaggaaaccccaattctttagctgctaatatgcag
aatttgaacttgaaccggccacctcctcctatgcctggttcaggtcctagaccatcaccc
ccttttggtcagtcaccaccaccgtttcctcaatcagcaccttcttatggggttcaacaa
caaccaaggccttctccaatggctaggcctggacctcctcctcctgctgcgatggctaga
ccaggtgggcctcttcaggtatcgcagcctggtgggttttcatcaaattttcaaggagga
agacccgctgctccgccttctaatcatcccccatttggctctagaccatcgaccggccca
ttgattggtggtggttcgtcgtttcctcagcctggtggtttcccagcttcaggtccacca
ggaagtgtagctgcacctcctccgacaggagctcgcccttttggttttggttcacctcca
cctatgggacctggcatgtccatgcctcctccctctggcgtgcctggcggtccgttgaat
aatggccctcctccctctggcatgcctggtggtccgttgagtaatggccctcctccctct
ggcatgcctggcggtccgttgagtaatgggcctcctcctccgatgatggggccgggggca
tttcctagaggatctcagttcccaagtggtcctatgatggctccaccgccaccctatgga
cagcctcctattgcaggccctttttcaggaaattcaccattatcttcacctcctgctcat
tcacttcctccgccaacaacttttcctggtgccccttatggcagaccacccatgcctgga
ggctttccctatggagcaccaccacagcagataccttctgctcctggtactcctggttca
atgtatggcatgggtccaatgccaaatcaatcaatgacctctgtctctagcccctcaaag
attgatatcaatcagataccaaggccaggttcaagctccagtccaatcgtgtatgaaact
cgcgtgcagaatcaagctaatcctccaccacccactactgttgattatattactagagac
actggaaattgcagcccgcgttacatgcgatgcacaatcaatcagatcccatgtactgtt
gatcttctatctacatctggtatgcaactggcattaatagtccaaccaatggcgctttct
catccatctgaagagcctattcaagttgtggactttggtgagagtggccctgttagatgt
tcacgttgtaagggatacatgaatcctttcatgaaattcattgaccaaggaaggaagttc
atatgtaacttgtgtggatacactgatgagactcctcgtgactaccagtgtaatctgggt
cctgatggtagacgtagggatgctgatgataggcctgagctgtgtaggggaactgttgac
tttgttgctacaaaagaatatatggtacgagatccaatgccagcagtatatttcttcctc
attgatgtctcaatgaatgcgattcaaacaggtgcaactgcagctgcttgcggtgcaatc
cagcaagtcctctcagaccttcctgaaggccctaggacatttgttggaattgccacattt
gactcaacaattcacttttataatttgaagcgtgcactgcagcagccgttgatgctcatt
gttcctgatgttcaagatgtgtatacacctttagaaacagatgtcattgttcagctatct
gagtgccgtcaacacctagagattttgctggaaagtatcccaaccatgtttcaggaaagt
aagagtcctgaatctgcctttggtgcagcagttaaggccgcattcttagctatgaagagc
actggaggaaagctcatggtgtttcaatcagttctgccttctgttggcattggagcactt
tcttctagagaggccgatggtagagctaacgcctctgcgggtgaaaaggaggcccataaa
ttactacaaccagcagaaaaaactttgaggaccatggctattgaatttgctgaataccag
gtctgcgtagatttgtttatcacaactcaagcctatgttgacatggcttcaatttctgac
atcccaagaacaactggaggacaggtttattgctattaccctttctcagctctttcagac
ccccccaagttatacaacgatcttagatggaatattacgaggccacaaggttttgaggct
gtcatgcgagtcagatgcagtcagggtattcaagtgcaagattactcagggaacttctgt
aaacgcataccaactgacattgatctacctgcgattgactgtgacaaagctgtaatggtg
acgttaaagcatgatgacaaactacaagatggagctgaatgcggttttcagtgtgccctt
ctgtataccaccatatctggagaaagaagaattagggttcttaacttatcactcccttgt
acaaacatgctcagtaacttgttccgctcagctgacctagattcccaatttgcttgtatg
ctgaaacaagcggctaatgatattccttccaaggcacttccgttggtaaaagagcaagca
actaatagttgcatcaccatactacattcctatcgtaaattctgcgctacagttacatca
accggacaacttattcttcctgaagcactcaagcttttgccactatatactctcgcttta
acaaaaggtgtggggttaagagcggacggtagaattgatgaccgatcattttggataaac
catgtgtcttcattgtctactcctttggctatccccctagtctatccaaggatgattgct
gttcatgacctagatgcaaaggataatgaagaaaatgtggttccttctcccatcccatta
caaagtgaacaccttagcgatgagggagtatttttccttgagaacggtgaagatggtttg
gtatatattggggaatcagtaaattcagatatcctacagaagctctttgatgttcggtca
gctgctgacattccaagtcagtatgtgctgcaacagtatgacaatccgctatcaaagaag
ttcaatgaggtggtgaatgaaataaggggacaaagaagttcttacctacgcattaaattg
tgcaagaaaggagatccagcaggaaatatgttgttccaatcgtatatggtagaggacagg
ggatcgggtggaccctcgtacgttgattttctcatttcagttcaccgtcaaatccaacac
aaactgaactga
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