Camelina sativa (false flax): 104711105
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Entry
104711105 CDS
T05044
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104711105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104711105
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104711105
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104711105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
HEAT_2
MCAfunc
zf-RING_UBOX
KAP
zf-Nse
HEAT_EZ
zf-C3HC4_4
RPW8
Arm_2
zf-C3HC4
MLKL_N
zf-NOSIP
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
104711105
NCBI-ProteinID:
XP_010426083
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All DBs
Position
9:complement(15959313..15962311)
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AA seq
655 aa
AA seq
DB search
MEEEKATAAQSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISDD
TLANLVGLKEAMSSAKDYLKFCSEGSKIYLVMEREQVTSKLLEVSVKLEQSLSQIPYEDL
DISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQLLCNKSSDVDSYQPALERVAKKLH
LMEIPDLAQESVALHEMVASSGGDVGANIEEMAMILKLIKDFVQTEDGNGEKQKVNCRSN
GQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQ
ALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSYRPRKVSSFSSPAEANKIEDLMWRLA
YGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLS
ICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLV
VLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILA
ILSSHPEGKAIIGSSDAVPSLVQFIRTGSPRNKENAAAVLVHLCSGDPQHLVEAQKLGLM
GPLIDLAENGTDRGKRKAAQLLERISRLAEQQKEMAQSQTEEAAEPASTTEATDT
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaagctactgctgcgcagagcttaatcgatgtagttaacgagattgcg
gcgatttcagattacaggattacggtgaagaagctttgttataatctagcgaggaggttg
aagctgcttgttcctatgtttgaggaaattagagagagcaacgagccgatcagcgatgat
actttggcgaatttggttggtttgaaagaagccatgagttctgctaaggattatctcaaa
ttctgcagcgaagggagcaagatttatctggtcatggagagggaacaagtgacaagtaaa
ttgctggaggtgtctgttaagttagaacagtctttgagccagattccgtatgaggatctc
gacatttctgatgaagttagagaacaggttgagctggttctcagccagtttaggcgagcc
aaaggaagagtagatgtatcagatgatgaactatatgaagatcttcagttgctgtgtaat
aaaagtagtgatgtagattcttatcagcctgccctagagcgggttgcaaagaagttacat
ctgatggagattcctgacctagctcaagaatcagtggctctgcatgaaatggttgcttcg
agtggtggagacgtcggtgcaaacattgaggagatggcaatgattctgaagctgattaag
gattttgtgcagactgaggatggcaacggcgagaagcagaaagttaactgcagaagtaat
ggacaaacttctacggccgcaagtcagaagatacccgtgattcctgatgatttccgctgt
ccgatatcgctggaaatgatgagagatccagttattgtttcatcagggcagacctacgaa
cgcacctgcattgagaagtggatagaaggtggacactcaacatgtccaaaaacacagcag
gcgctaacaagcacaaccctcacaccaaactatgttctccgtagtctcatagctcagtgg
tgcgaggccaacgatattgagcctccaaagccaccaagcagttacagacctagaaaagta
tcgtcattctcgtctccagcagaagcaaacaagatcgaagatctaatgtggagactcgct
tacggaaaccccgaggaccaacggtctgcagctggagaaatccgccttcttgcaaaacga
aatgcagacaaccgcgtggccatagccgaagctggagccatacctcttctcgtaggcctt
ctctcaactcctgattctcgtatccaagaacattcagtaacagcccttttaaacctctcc
atatgtgagaacaacaaaggagccattgtttctgctggagctattcctggtatagttcaa
gtactcaagaaaggaagcatggaagccagagagaatgcggcggctacacttttcagtcta
tcagtgattgacgaaaacaaagtgactatcggtgccttgggagcgattcccccacttgtt
gttttgcttaatgaagggacacaaagaggcaagaaagatgccgctactgcactctttaac
ctctgcatataccaaggaaacaaaggaaaagccatacgtgcaggagtgattcccacgttg
actagactcttgacagagcccggaagcggaatggtcgacgaggcgcttgcaattttggcg
attctctctagccatcccgaagggaaagcaatcataggatcctctgatgcagtcccgagt
ctagttcagtttattagaactggctcgcctagaaacaaagagaacgcagctgcggttcta
gtccacctctgttctggagacccacaacatctagtcgaagcacagaaacttggccttatg
ggtccattgatagatttagctgaaaatgggactgatagagggaaacgaaaagcagcacaa
ttacttgaacgcatcagccgtctcgctgaacagcagaaggaaatggctcagtcacaaacc
gaagaagctgctgaaccagcatccactacagaagctactgatacttaa
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