Camelina sativa (false flax): 104711116
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Entry
104711116 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104711116
04121 Ubiquitin system [BR:
csat04121
]
104711116
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104711116
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104711116
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104711116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING-like
zf-RING_16
zf-RING_10
zf-HC5HC2H_2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
104711116
NCBI-ProteinID:
XP_010426101
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Position
9:complement(16076534..16078314)
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AA seq
403 aa
AA seq
DB search
MMPNSRSATITPATEPTTTTTTTVTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIE
EIEDSSSNNSSVAAIPATTTNQEVRSVGDSHRSVIRRRRSNRRTSFNPVIVLHGGGGAGE
RVENEEGDGAARERRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGN
GIGRSGNPPASKSAIESLPRVEISDCHMKAEANCAVCTEVFEAGVEGREMPCKHIFHGDC
IVPWLSIRNSCPVCRFELPSDPIQRSNEEENAVGMTIWRLPGGGFAVGRFNAAMREGERV
LPVVLTEMDGGGLGSNEGPRRISWVRAHETPEMSRNGGSSGNGGRLRRAVRGMVSFMRRV
RPNRGSSSSSSSHSNANSNLIDLDSDGETRVMNRSTSLIRRFF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaattctagatcggcgactataactccggcgaccgaaccaacaaccaccacc
acaacgacggttacgacgtcgtactggtgttacagttgtacgcgattcatcagcgtttgg
gaagaccaagacgcgaacgctggagtcttatgtccttattgcaacggtggattcatcgaa
gagatcgaagattcttcttctaataattcttccgttgcggcgattccggcgacgacgacg
aatcaggaagttagatcggttggagatagtcatagatctgtaattagacgccgtagatcc
aatcgtcggacgtcgtttaatccggttattgttttgcacggaggaggaggagctggtgag
agagttgagaacgaagaaggagacggagctgctagagaacgacgcgcttatgagttttat
tacgatgatggatctggttcaggtcttagacctcttcctgattctgtttccgagatcttg
atgggatctggatttgaaaggttgcttgaacaattgagtcagatcgaagcgtctggtaac
ggaatcggtagatctgggaacccgccggcgtcgaaatcggcgattgagtctttacctaga
gtcgagatctcagattgtcatatgaaagcggaagctaattgcgccgtgtgcacggaggtc
ttcgaagcaggtgtcgaaggtcgtgagatgccgtgtaaacacatttttcacggtgattgt
atcgttccatggctctcgattcggaactcgtgtcccgtttgtagattcgagttaccttcg
gatccgattcaacggagtaacgaggaagaaaacgctgtggggatgacgatttggagatta
ccgggaggtggtttcgctgttgggaggtttaacgcggcgatgagagaaggagagagggtt
ttgcctgtggtgttgacggagatggatggtggtggacttggtagtaatgaaggaccgaga
cgtatctcgtgggttagagcacatgagacaccggagatgagtagaaacggtgggagttca
ggtaatggtggtagattgagaagagctgttcgtggaatggtttcgtttatgagaagagtg
agaccaaatcgtggctcttcttcttcctcttcttctcattcgaatgcgaattcgaatctt
attgatttggatagtgatggtgaaactagagtaatgaatcgatcgacttcgttgatcaga
agatttttctga
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